RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 GTF2IRD2Q86UP8 949 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 JAZF1Q86VZ6 243 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 C8orf59Q8N0T1 100 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-205ENST00000531303 RPRMLQ8N4K4 120 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ZIC4Q8N9L1 334 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 C9orf106Q8NAJ2 232 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ST6GALNAC3Q8NDV1 305 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 WNT2BQ93097 391 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 NMNAT3Q96T66 252 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 PRRG3Q9BZD7 231 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF226Q9NYT6 803 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 RNF6Q9Y252 685 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF835Q9Y2P0 537 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 FAM215AQ9Y5M1 114 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 FAM183AA6NL82 134 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 IGHMP01871 453 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 APEHP13798 732 aaKnown RBP16.93■□□□□ 0.3
SMPD1-205ENST00000531303 CDKN2AP42771 156 aaKnown RBP16.93■□□□□ 0.3
SMPD1-205ENST00000531303 SLC16A1P53985 500 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 NIPAL3Q6P499 406 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 LEG1Q6P5S2 330 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.93■□□□□ 0.3
SMPD1-205ENST00000531303 GCNT2Q8N0V5 402 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 DEPDC4Q8N2C3 294 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 SYT14Q8NB59 555 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 SETD9Q8NE22 299 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF519Q8TB69 540 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 INTS12Q96CB8 462 aaKnown RBP16.93■□□□□ 0.3
SMPD1-205ENST00000531303 FN3KQ9H479 309 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 MED20Q9H944 212 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 CMC2Q9NRP2 79 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 LRRC42Q9Y546 428 aa16.93■□□□□ 0.3
SMPD1-205ENST00000531303 A6NIZ1 184 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 CD8B2A6NJW9 211 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 TXNDC12O95881 172 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 YES1P07947 543 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF3P17036 446 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 NTF4P34130 210 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 PTGER4P35408 488 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 RAP1BP61224 184 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 RAP1AP62834 184 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 IL18R1Q13478 541 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 CRMP1Q14194 572 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 PDK3Q15120 406 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF362Q5T0B9 420 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-205ENST00000531303 USP51Q70EK9 711 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 AAED1Q7RTV5 226 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 BCDIN3DQ7Z5W3 292 aaKnown RBP16.92■□□□□ 0.3
SMPD1-205ENST00000531303 ENTHD1Q8IYW4 607 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 SLC37A3Q8NCC5 494 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 HDAC2Q92769 488 aaKnown RBP16.92■□□□□ 0.3
SMPD1-205ENST00000531303 ANKRD60Q9BZ19 345 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 TP63Q9H3D4 680 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-205ENST00000531303 RERGLQ9H628 205 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 RNF122Q9H9V4 155 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 EMC3Q9P0I2 261 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 KLHL21Q9UJP4 597 aa16.92■□□□□ 0.3
SMPD1-205ENST00000531303 NOSIPQ9Y314 301 aaKnown RBP16.92■□□□□ 0.3
SMPD1-205ENST00000531303 FREM1Q5H8C1 2179 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 IGKV3D-15A0A087WSY6 115 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 TRGV8A0A0C4DH27 118 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 GPR171O14626 319 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 TRMUO75648 421 aaKnown RBP16.91■□□□□ 0.3
SMPD1-205ENST00000531303 ACADSP16219 412 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 MYF6P23409 242 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 SELENOPP49908 381 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 PER3P56645 1201 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 SIRPAP78324 504 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 ITGADQ13349 1161 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 PLBD1Q6P4A8 553 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 B3GNT6Q6ZMB0 384 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 SEM1Q6ZVN7 128 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 CPOQ8IVL8 374 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 CNIH3Q8TBE1 160 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 TM9SF2Q99805 663 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
SMPD1-205ENST00000531303 NPIPB13A6NJU9 1138 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 NPIPB4C9JG80 1138 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 DENRO43583 198 aaKnown RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 RENP00797 406 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 CLRN1P58418 232 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 ISL1P61371 349 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 CD47Q08722 323 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 MRPL49Q13405 166 aaKnown RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 MAD2L1BPQ15013 274 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 TMEM201Q5SNT2 666 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 NUFIP2Q7Z417 695 aaKnown RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 THAP5Q7Z6K1 395 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 CNEP1R1Q8N9A8 125 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 NPEPL1Q8NDH3 523 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 OR8J1Q8NGP2 316 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 OR9Q1Q8NGQ5 310 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 OR6X1Q8NH79 312 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 TMEM163Q8TC26 289 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 ZNF566Q969W8 418 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 SLC25A44Q96H78 314 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 OR2M2Q96R28 347 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 C12orf49Q9H741 205 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 BCO1Q9HAY6 547 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 HINT3Q9NQE9 182 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms