RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RTL6Q6ICC9 239 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SULT1C3Q6IMI6 304 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ARSKQ6UWY0 536 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 KLHL7Q8IXQ5 586 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 FBXW8Q8N3Y1 598 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 LIX1Q8N485 282 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 FBXO36Q8NEA4 188 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 NUBPLQ8TB37 319 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF721Q8TF20 911 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 DYRK2Q92630 601 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ESAMQ96AP7 390 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ANKRD9Q96BM1 317 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 WDR34Q96EX3 536 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 KRT12Q99456 494 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 MAPKAP1Q9BPZ7 522 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 GPATCH1Q9BRR8 931 aaKnown RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 TBCDQ9BTW9 1192 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 MCRIP2Q9BUT9 160 aaKnown RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 MS4A8Q9BY19 250 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 DERL2Q9GZP9 239 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CXXC4Q9H2H0 198 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CAB39LQ9H9S4 337 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SERINC1Q9NRX5 453 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CD274Q9NZQ7 290 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 TXNDC16Q9P2K2 825 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SPRR3Q9UBC9 169 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 B4GALT7Q9UBV7 327 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 DAPK2Q9UIK4 370 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF490Q9ULM2 529 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HEATR5BQ9P2D3 2071 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 NF1P21359 2839 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 MYO7BQ6PIF6 2116 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SCN2AQ99250 2005 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SAP18O00422 153 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SCELO95171 688 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 IGKV3-11P04433 115 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CCDC166P0CW27 439 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CD1DP15813 335 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 TCP1P17987 556 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 KLK2P20151 261 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 DNASE1P24855 282 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ATP5A1P25705 553 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SERPINB1P30740 379 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ASCL1P50553 236 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 RAP1GDS1P52306 607 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 IGLV3-21P80748 117 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CHIT1Q13231 466 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SNTB1Q13884 538 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 FASTKD3Q14CZ7 662 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 OR4D1Q15615 310 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CEBPEQ15744 281 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF791Q3KP31 576 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 PIGGQ5H8A4 983 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 KHDRBS2Q5VWX1 349 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 MED27Q6P2C8 311 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 LRRC70Q7Z2Q7 622 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 TGIF2LYQ8IUE0 185 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 OR4N5Q8IXE1 308 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 C9orf40Q8IXQ3 194 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF440Q8IYI8 595 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 DND1Q8IYX4 353 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ZBED8Q8IZ13 594 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 LRRC25Q8N386 305 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ACOT4Q8N9L9 421 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 GOT1L1Q8NHS2 421 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 PAQR8Q8TEZ7 354 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 PHLDA1Q8WV24 401 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CCDC107Q8WV48 283 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CDKL2Q92772 493 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 EXT2Q93063 718 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 UBE2E3Q969T4 207 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 RBM18Q96H35 190 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF597Q96LX8 424 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 JSRP1Q96MG2 331 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 GAL3ST4Q96RP7 486 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 SEPHS2Q99611 448 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 PELOQ9BRX2 385 aaKnown RBP5.81□□□□□ -1.48
CSDE1-213ENST00000530784 MS4A12Q9NXJ0 267 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 HAO2Q9NYQ3 351 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 PHF11Q9UIL8 331 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 POLQO75417 2590 aa5.81□□□□□ -1.48
CSDE1-213ENST00000530784 CNTRLQ7Z7A1 2325 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 C15orf38-AP3S2A0A0A6YYH1 394 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 IQANK1A0A1B0GTG1 560 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 E7ESA3 106 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 ZSCAN12O43309 604 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 SH3BGRLO75368 114 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 PIAS1O75925 651 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 DFFBO76075 338 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 WISP3O95389 354 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 IGHV4-31P0DP07 118 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 STMN1P16949 149 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 EPORP19235 508 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 GDF1P27539 372 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 TLX1P31314 330 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CAPZA2P47755 286 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 TRPC1P48995 793 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 TNFRSF17Q02223 184 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms