RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 GAAP10253 952 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 SAGP10523 405 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 KITP10721 976 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 PTDSS1P48651 473 aaKnown RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 LMO4P61968 165 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 RPS23P62266 143 aaKnown RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 GALK2Q01415 458 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 FADDQ13158 208 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 C6orf10Q5SRN2 563 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 HHATQ5VTY9 493 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 PXKQ7Z7A4 578 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 SNX32Q86XE0 403 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF418Q8TF45 676 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 FAM216AQ8WUB2 273 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 SLC47A1Q96FL8 570 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 FOXB1Q99853 325 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 RAD21L1Q9H4I0 556 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF385DQ9H6B1 395 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 NARFLQ9H6Q4 476 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 MED29Q9NX70 200 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 MYEF2Q9P2K5 600 aaKnown RBP12.8□□□□□ -0.36
CAPN1-219ENST00000530495 FBXL3Q9UKT7 428 aa12.8□□□□□ -0.36
CAPN1-219ENST00000530495 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 C5orf58C9J3I9 102 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 WIPF1O43516 503 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 TPST1O60507 370 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 RP2O75695 350 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 UBL3O95164 117 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 BGLAPP02818 100 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 SERPINA5P05154 406 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 B4GALT1P15291 398 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 HOXB9P17482 250 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-219ENST00000530495 GIPRP48546 466 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
CAPN1-219ENST00000530495 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 CAMK2DQ13557 499 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 MAD2L1BPQ15013 274 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-219ENST00000530495 DHRS4L2Q6PKH6 230 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 USP43Q70EL4 1123 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 PIWIL3Q7Z3Z3 882 aaKnown RBP12.79□□□□□ -0.36
CAPN1-219ENST00000530495 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 OR6N1Q8NGY5 312 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 OR51F2Q8NH61 342 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 MGARPQ8TDB4 240 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 MOGAT1Q96PD6 335 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 EPYCQ99645 322 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF416Q9BWM5 594 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 LPAR2Q9HBW0 351 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
CAPN1-219ENST00000530495 DUSP13Q9UII6 198 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 PCDHB10Q9UN67 800 aa12.79□□□□□ -0.36
CAPN1-219ENST00000530495 TRAV20A0A0B4J274 112 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 PLPP3O14495 311 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 UBDO15205 165 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 PPIHO43447 177 aaKnown RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 NCR1O76036 304 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 RAB36O95755 333 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 NAT2P11245 290 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 ANPEPP15144 967 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 EGR1P18146 543 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 MYBPC1Q00872 1141 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 PUDPQ08623 228 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 RAB39AQ14964 217 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 KRT73Q86Y46 540 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 TEX29Q8N6K0 151 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 GCDHQ92947 438 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 SPATA5L1Q9BVQ7 753 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 TESQ9UGI8 421 aaKnown RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
CAPN1-219ENST00000530495 FZR1Q9UM11 496 aa12.78□□□□□ -0.36
CAPN1-219ENST00000530495 A0A0B4J2E0 115 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 A0A1B0GX12 115 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 TRIM77I1YAP6 450 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 HILS1P60008 231 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 ACTG1P63261 375 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 MMEL1Q495T6 779 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 SLC2A7Q6PXP3 512 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 MAVSQ7Z434 540 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
CAPN1-219ENST00000530495 MIER2Q8N344 545 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms