RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 M0R3G1 203 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 GYG2O15488 501 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 CLOCKO15516 846 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 BCL10O95999 233 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 PLAUP00749 431 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 FABP3P05413 133 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 CD3EP07766 207 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 SH3BGRP55822 239 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 SMIM11AP58511 58 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 PRPS1P60891 318 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 RPS4XP62701 263 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 ARF1P84077 181 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 FHL1Q13642 323 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 CEACAM16Q2WEN9 425 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 TBRG1Q3YBR2 411 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 ANKDD1AQ495B1 522 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 HIKESHIQ53FT3 197 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 LCN8Q6JVE9 175 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 ANKRD16Q6P6B7 361 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 PAMR1Q6UXH9 720 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 PIWIL3Q7Z3Z3 882 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 MEX3DQ86XN8 651 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 OR6N1Q8NGY5 312 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 MOSPD2Q8NHP6 518 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 MAGEE2Q8TD90 523 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 TMEM54Q969K7 222 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC25A44Q96H78 314 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 FUZQ9BT04 418 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 OBP2BQ9NPH6 170 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 B3GAT2Q9NPZ5 323 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 PLEKHA6Q9Y2H5 1048 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 TRBV4-1A0A0J9YWV2 114 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ACOT8O14734 319 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ATE1O95260 518 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 WNT11O96014 354 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 RAF1P04049 648 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 SAGP10523 405 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 DNASE1P24855 282 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 HOXC12P31275 282 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC9A3P48764 834 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF83P51522 516 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 IST1P53990 364 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 BSPH1Q075Z2 132 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 BNIP1Q12981 228 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 MELKQ14680 651 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 SEC23BQ15437 767 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ACKR1Q16570 336 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ADAM5Q6NVV9 412 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 KLHL17Q6TDP4 642 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 KLHL24Q6TFL4 600 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 OAFQ86UD1 273 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ZDHHC21Q8IVQ6 265 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 LRRC75AQ8NAA5 344 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 OR52J3Q8NH60 311 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 OR51A7Q8NH64 312 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 LILRB1Q8NHL6 650 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 POP5Q969H6 163 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF566Q969W8 418 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ASB9Q96DX5 294 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF347Q96SE7 839 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 SEPHS2Q99611 448 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 BTBD10Q9BSF8 475 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 C1QTNF6Q9BXI9 259 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 NELFAQ9H3P2 528 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 CCM2LQ9NUG4 571 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 ITGB1BP2Q9UKP3 347 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 TMEM5Q9Y2B1 443 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 MAGED1Q9Y5V3 778 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-216ENST00000529856 RAI1Q7Z5J4 1906 aaPredicted RBP11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 TRAV27A0A087WT01 109 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 A0A096LPE4 126 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ARPC4-TTLL3A0A0A6YYG9 625 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 NPIPB13A6NJU9 1138 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 NPIPB4C9JG80 1138 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 CDC42EP2O14613 210 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 GADD45GO95257 159 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 PGA4P0DJD7 388 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 PAX7P23759 505 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 PTAFRP25105 342 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 GPR4P46093 362 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 OMPP47874 163 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms