RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 G3V2T6 193 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 TNFRSF11BO00300 401 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 FFAR1O14842 300 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 LDLRAD4O15165 306 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ADAMDEC1O15204 470 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 HS6ST1O60243 411 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 KIAA0513O60268 411 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 TPST2O60704 377 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ALOX12BO75342 701 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 BCAS1O75363 584 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 STX11O75558 287 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 UGT2B17O75795 530 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SEC14L2O76054 403 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CLIC3O95833 236 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 LGI1O95970 557 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 MT-CO3P00414 261 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 IGKV3-11P04433 115 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ALPLP05186 524 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GLAP06280 429 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GNAO1P09471 354 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 IFI6P09912 130 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GKN3PP0CG01 181 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CT45A8P0DMV1 189 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CT45A9P0DMV2 189 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 THRBP10828 461 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CYP4B1P13584 511 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 IL7RP16871 459 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ITGA2P17301 1181 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 HOXB6P17509 224 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 PTNP21246 168 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 RPS4Y1P22090 263 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 CAMLGP49069 296 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 DAPP51397 102 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 EMP2P54851 167 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SLURP1P55000 103 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SLC37A1P57057 533 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 RGS8P57771 180 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 EEF1A1P68104 462 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 S100A12P80511 92 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PPP2R2BQ00005 443 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PSG6Q00889 435 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 NPRL3Q12980 569 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 BIKQ13323 160 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 DNASE1L3Q13609 305 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 IL11RAQ14626 422 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PDK3Q15120 406 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 MED22Q15528 200 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ISXQ2M1V0 245 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 NDUFAF6Q330K2 333 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CT45A2Q5DJT8 189 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CMPK2Q5EBM0 449 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 NHSL2Q5HYW2 709 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 FGD3Q5JSP0 725 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PDZK1Q5T2W1 519 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 MRPL2Q5T653 305 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 STPG1Q5TH74 334 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 KRT80Q6KB66 452 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ZCCHC12Q6PEW1 402 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 DHRS4L2Q6PKH6 230 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 C16orf47Q6ZP98 133 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 ANKRD37Q7Z713 158 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GLRX5Q86SX6 157 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PIP4P1Q86T03 277 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 TPRA1Q86W33 373 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 MEX3DQ86XN8 651 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 HIPK1Q86Z02 1210 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CHERPQ8IWX8 916 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 C9orf40Q8IXQ3 194 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OFCC1Q8IZS5 231 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SVOPLQ8N434 492 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ZNF808Q8N4W9 903 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 DHRSXQ8N5I4 330 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 PACRGLQ8N7B6 248 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 BCORP1Q8N888 145 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 LINC01356Q8N9X3 169 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 BEND2Q8NDZ0 799 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CHDHQ8NE62 594 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 BBS1Q8NFJ9 593 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR7G1Q8NGA0 311 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR9Q2Q8NGE9 314 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR52L2PQ8NGH6 319 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR4C15Q8NGM1 316 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR6T1Q8NGN1 323 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 OR14A16Q8NHC5 309 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GIPC3Q8TF64 312 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 GLMPQ8WWB7 406 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 POP5Q969H6 163 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 ADIPOR1Q96A54 375 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 C8orf44Q96CB5 159 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 FBXL20Q96IG2 436 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ZNF354BQ96LW1 612 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 C5orf34Q96MH7 638 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 ZNF578Q96N58 590 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 GNRHR2Q96P88 292 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 DCLRE1CQ96SD1 692 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 MBOAT4Q96T53 435 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 EPYCQ99645 322 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CMKLR1Q99788 373 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms