RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TMCC2O75069 709 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 PLAUP00749 431 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ASAH2BP0C7U1 165 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ADORA3P0DMS8 318 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 RAP2AP10114 183 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 SAGP10523 405 aaPredicted RBP8.93□□□□□ -0.98
VPS28-204ENST00000526054 PAX1P15863 534 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 FUT1P19526 365 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 PSMB1P20618 241 aaKnown RBP8.93□□□□□ -0.98
VPS28-204ENST00000526054 AHCYP23526 432 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 RRM2P31350 389 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 MAGEA2P43356 314 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ATP5J2P56134 94 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 CLDN17P56750 224 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 POU3F1Q03052 451 aaPredicted RBP8.93□□□□□ -0.98
VPS28-204ENST00000526054 PRKCDQ05655 676 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 IQCCQ4KMZ1 466 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 C1orf146Q5VVC0 180 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ALKBH2Q6NS38 261 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 PODNL1Q6PEZ8 512 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 CREB3L2Q70SY1 520 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 AAED1Q7RTV5 226 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 UBE2J2Q8N2K1 259 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 KDM8Q8N371 416 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ZNF611Q8N823 705 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 SLC7A13Q8TCU3 470 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 LIPHQ8WWY8 451 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 IGFBPL1Q8WX77 278 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 BPIFA2Q96DR5 249 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 RSRC1Q96IZ7 334 aaKnown RBP8.93□□□□□ -0.98
VPS28-204ENST00000526054 TMEM204Q9BSN7 226 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 NDEL1Q9GZM8 345 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 OR10A4Q9H209 315 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 YY1AP1Q9H869 796 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 C20orf141Q9NUB4 165 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 B3GAT1Q9P2W7 334 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 TMCC3Q9ULS5 477 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 RCE1Q9Y256 329 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 GPR52Q9Y2T5 361 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 TRBV4-1A0A0J9YWV2 114 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 OR6C65A6NJZ3 312 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 KIAA1324LA8MWY0 1029 aaPredicted RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 EFCAB9A8MZ26 197 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 C11orf98E9PRG8 122 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 MS4A18H0YCH9 400 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 RNF13O43567 381 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 TRAF3IP2O43734 574 aaPredicted RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 KRT36O76013 467 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 IFNGR2P38484 337 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 SLC9A3P48764 834 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 RPS4XP62701 263 aaKnown RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 ZP4Q12836 540 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 P2RY6Q15077 328 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 TAF11Q15544 211 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 MS4A18Q3C1V0 323 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 ANKDD1AQ495B1 522 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 FBXW9Q5XUX1 488 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 NIPAL3Q6P499 406 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 Q6ZT83 130 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 ABHD12BQ7Z5M8 362 aaPredicted RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 PXKQ7Z7A4 578 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 EPHX4Q8IUS5 362 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 ADGRG5Q8IZF4 528 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 LRRC17Q8N6Y2 441 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 POMGNT2Q8NAT1 580 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 STEAP2Q8NFT2 490 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 OR4K5Q8NGD3 323 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 OR52J3Q8NH60 311 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 AKAP1Q92667 903 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS28-204ENST00000526054 S100PBPQ96BU1 408 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 ZNF385AQ96PM9 386 aaKnown RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 SLCO5A1Q9H2Y9 848 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 ZNF701Q9NV72 531 aaPredicted RBP8.92□□□□□ -0.98
VPS28-204ENST00000526054 UPB1Q9UBR1 384 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 PRSS50Q9UI38 385 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 LAMP3Q9UQV4 416 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 RNF115Q9Y4L5 304 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 USF3Q68DE3 2245 aa8.92□□□□□ -0.98
VPS28-204ENST00000526054 TCRBV3S1A0A5B6 114 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 SH3PXD2BA1X283 911 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 BLOC1S5-TXNDC5H3BN57 136 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 TNFRSF11BO00300 401 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 CLOCKO15516 846 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 SLC43A1O75387 559 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 SERPINI2O75830 405 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 KRT33AO76009 404 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 HPRP00739 348 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 ADAP00813 363 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 IGHV3-9P01782 118 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 FUT4P22083 530 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 IL32P24001 234 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 GPR4P46093 362 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 SELENOPP49908 381 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 RPL18Q07020 188 aaKnown RBP8.91□□□□□ -0.98
VPS28-204ENST00000526054 GK3PQ14409 553 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 TSC22D1Q15714 1073 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 OR2T5Q6IEZ7 315 aa8.91□□□□□ -0.98
VPS28-204ENST00000526054 TBPL2Q6SJ96 375 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms