RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 C9orf40Q8IXQ3 194 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ARHGAP24Q8N264 748 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SLC5A8Q8N695 610 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 COX18Q8N8Q8 333 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 C17orf47Q8NEP4 570 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 OR5D16Q8NGK9 328 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 FAM110BQ8TC76 370 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SLC22A8Q8TCC7 542 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MIPOL1Q8TD10 442 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SLC38A5Q8WUX1 472 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSMF1Q92530 271 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PIK3R3Q92569 461 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CDS1Q92903 461 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 GIMAP5Q96F15 307 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 OTUB1Q96FW1 271 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 VSTM2LQ96N03 204 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ZNF583Q96ND8 569 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 GAL3ST4Q96RP7 486 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SDF2Q99470 211 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 LMF2Q9BU23 707 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 WWTR1Q9GZV5 400 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ING2Q9H160 280 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 IKZF5Q9H5V7 419 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TMEM38AQ9H6F2 299 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 KAT8Q9H7Z6 458 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 MTHFD2LQ9H903 347 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 ZBTB20Q9HC78 741 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 C20orf141Q9NUB4 165 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CMTM6Q9NX76 183 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CALML5Q9NZT1 146 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MRPL15Q9P015 296 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CD300AQ9UGN4 299 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TEKT2Q9UIF3 430 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ZNF223Q9UK11 482 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 YARS2Q9Y2Z4 477 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 KCNE3Q9Y6H6 103 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 A0A087WV48 116 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 A0A0G2JPF8 293 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TEX13CA0A0J9YWL9 993 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PRORSD1PA6NEY8 169 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 FRG2CA6NGY1 282 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HNRNPCL2B2RXH8 293 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HNRNPCL3B7ZW38 293 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PRSS44E7EML9 344 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 K7ENP7 123 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 M0QX08 132 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HMGN4O00479 90 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 NME4O00746 187 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 WNT9BO14905 357 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TO15178 435 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ACOX3O15254 700 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HSPA12AO43301 675 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HS6ST1O60243 411 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 SERPINB7O75635 380 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 OR2J2O76002 312 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 KCNK2O95069 426 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 STAMBPO95630 424 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 IFNA14P01570 189 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GUSBP08236 651 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HNRNPCL4P0DMR1 293 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ACP2P11117 423 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HSD17B1P14061 328 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 DAOP14920 347 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TMEM11P17152 192 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TCN1P20061 433 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 ATP6V1C1P21283 382 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CPT2P23786 658 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CHATP28329 748 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 HTR1EP28566 365 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 IL12BP29460 328 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 LCN1P31025 176 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PIGAP37287 484 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CAPZA2P47755 286 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 RFX3P48380 749 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GSK3BP49841 420 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GZMMP51124 257 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 SSR4P51571 173 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CRISP3P54108 245 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PNLIPRP2P54317 469 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 NCALDP61601 193 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 MRPS22P82650 360 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 PLCXD2Q0VAA5 305 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 VEZF1Q14119 521 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 SYPL1Q16563 259 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 IZUMO4Q1ZYL8 232 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ZNF630Q2M218 657 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 C2orf76Q3KRA6 126 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ACER2Q5QJU3 275 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GCNT6Q5T4J0 391 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 AGAP7PQ5VUJ5 663 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GLYATQ6IB77 296 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 REEP3Q6NUK4 255 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ARHGAP11AQ6P4F7 1023 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 INO80CQ6PI98 192 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 OPN5Q6U736 354 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PRSS57Q6UWY2 283 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms