RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 OR2M3Q8NG83 312 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 OR52R1Q8NGF1 315 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 OR8B4Q96RC9 309 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 SIAEQ9HAT2 523 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 H3BQ06 376 aaPredicted RBP12.71□□□□□ -0.37
LRRK1-202ENST00000525284 MAOBP27338 520 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 H3F3AP84243 136 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 TIGITQ495A1 244 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 SYT13Q7L8C5 426 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 CDH26Q8IXH8 852 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 ZNF566Q969W8 418 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 FZD8Q9H461 694 aa12.71□□□□□ -0.37
LRRK1-202ENST00000525284 ADH4P08319 380 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 SPP1P10451 314 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 ETFDHQ16134 617 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 OR5A2Q8NGI9 324 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 IFI44Q8TCB0 444 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 HRASLS5Q96KN8 279 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 EMC7Q9NPA0 242 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 NECAP2Q9NVZ3 263 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 OR1A1Q9P1Q5 309 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 DNMT3BQ9UBC3 853 aaKnown RBP12.71□□□□□ -0.38
LRRK1-202ENST00000525284 PEAK1Q9H792 1746 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 OSTM1Q86WC4 334 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 VRK2Q86Y07 508 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 OR51H1Q8NH63 302 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 DTD1Q8TEA8 209 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 NAA50Q9GZZ1 169 aaKnown RBP12.71□□□□□ -0.38
LRRK1-202ENST00000525284 SCPEP1Q9HB40 452 aa12.71□□□□□ -0.38
LRRK1-202ENST00000525284 HBQ1P09105 142 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 NPY1RP25929 384 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 APEX1P27695 318 aaKnown RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 CCKARP32238 428 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 RAB7BQ96AH8 199 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ADOQ96SZ5 270 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 IKZF5Q9H5V7 419 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 A0A1W2PPQ1 181 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 CDC14CA4D256 554 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SUB1P53999 127 aaKnown RBP eCLIP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF691Q5VV52 312 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 OR5AR1Q8NGP9 310 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 BTNL2Q9UIR0 455 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 J3KTA2 159 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ARPC3O15145 178 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 REEP5Q00765 189 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 FA2HQ7L5A8 372 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SLC2A11Q9BYW1 496 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 CORO2AQ92828 525 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
LRRK1-202ENST00000525284 CMBLQ96DG6 245 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 OBP2AQ9NY56 170 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SLC35A3Q9Y2D2 325 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 PIRO00625 290 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 FDXRP22570 491 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SHC1P29353 583 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SULT1A2P50226 295 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 RNF212Q495C1 297 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF534Q76KX8 674 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 ADIPOR2Q86V24 386 aa12.7□□□□□ -0.38
LRRK1-202ENST00000525284 SLC9B1P1A6NJY1 282 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 H3BVH4 76 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 COCHO43405 550 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 OR7C2O60412 319 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 S100A8P05109 93 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 HAPLN1P10915 354 aaPredicted RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 OR1Q1Q15612 314 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF528Q3MIS6 628 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 AKIRIN1Q9H9L7 192 aaPredicted RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 ATP13A2Q9NQ11 1180 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 RBFOX1Q9NWB1 397 aaKnown RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 NKX6-3A6NJ46 265 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 SPINT2O43291 252 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 HTR3AP46098 478 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 NHLH1Q02575 133 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 NHLH2Q02577 135 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 SMN1Q16637 294 aaKnown RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 RPL3LQ92901 407 aaKnown RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 DUSP13Q9UII6 198 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF443Q9Y2A4 671 aaPredicted RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 PCDHGA9Q9Y5G4 932 aaKnown RBP12.69□□□□□ -0.38
LRRK1-202ENST00000525284 SLC43A1O75387 559 aa12.69□□□□□ -0.38
LRRK1-202ENST00000525284 OR5H8P0DN80 308 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms