RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CFLARO15519 480 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 EMC8O43402 210 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TSPAN2O60636 221 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 UGT2B11O75310 529 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GUCY1B2O75343 617 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BCAS1O75363 584 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GCM2O75603 506 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR2J2O76002 312 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR6B1O95007 311 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NKX2-2O95096 273 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 WDPCPO95876 746 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 EPPINO95925 133 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 IL6P05231 212 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SERPINA7P05543 415 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 IFI6P09912 130 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZCCHC18P0CG32 403 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NPIPA8P0DM63 369 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR12D1P0DN82 309 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CCL3P10147 92 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TNNI3P19429 210 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ITGA3P26006 1051 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ABCD3P28288 659 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BDKRB2P30411 391 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NTSP30990 170 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 S100A3P33764 101 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MPIP34949 423 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SOAT1P35610 550 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CPOXP36551 454 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SOX3P41225 446 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CCT3P49368 545 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CCL11P51671 97 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CRYBA2P53672 197 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CLNS1AP54105 237 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 FBXW4P57775 412 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 KCNK10P57789 538 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MLF1P58340 268 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MTPNP58546 118 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 STX1BP61266 288 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 AIMP2Q13155 320 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 LY6DQ14210 128 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 LASP1Q14847 261 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SYPL1Q16563 259 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 EIF2S3LQ2VIR3 472 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NADK2Q4G0N4 442 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PIGGQ5H8A4 983 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ACER2Q5QJU3 275 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CCNJQ5T5M9 372 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 METTL21CQ5VZV1 264 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GGNBP1Q5YKI7 109 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 FAM91A1Q658Y4 838 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NANOGP8Q6NSW7 305 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MFSD12Q6NUT3 480 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CDC73Q6P1J9 531 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 IGFL2Q6UWQ7 119 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 C6orf89Q6UWU4 347 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 APOOLQ6UXV4 268 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 LINC00696Q6ZRV3 163 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ASB18Q6ZVZ8 466 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 C6orf120Q7Z4R8 191 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 R3HCC1LQ7Z5L2 792 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 DHDDSQ86SQ9 333 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 COMTD1Q86VU5 262 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RNF130Q86XS8 419 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PTOV1Q86YD1 416 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BEST3Q8N1M1 668 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BCORP1Q8N888 145 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC197Q8NCU1 140 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ADAD2Q8NCV1 583 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CATSPER1Q8NEC5 780 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 FAM110BQ8TC76 370 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SFXN5Q8TD22 340 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RNF138Q8WVD3 245 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR5P2Q8WZ92 322 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CDS1Q92903 461 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 DAZLQ92904 295 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RAB8BQ92930 207 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 HGDQ93099 445 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MAL2Q969L2 176 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 EFHD2Q96C19 240 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 LRRC58Q96CX6 371 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NEURL3Q96EH8 262 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZBED6CLQ96FA7 236 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 VMP1Q96GC9 406 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RBM18Q96H35 190 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ANKRD27Q96NW4 1050 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 MS4A4EQ96PG1 132 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BTBD9Q96Q07 612 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR7D2Q96RA2 312 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PANX1Q96RD7 426 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GAL3ST4Q96RP7 486 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RASL10BQ96S79 203 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 WFDC6Q9BQY6 131 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GPATCH1Q9BRR8 931 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SLC35A5Q9BS91 424 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 LMF2Q9BU23 707 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 WWTR1Q9GZV5 400 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NSRP1Q9H0G5 558 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms