RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CLIP4Q8N3C7 705 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 OR6N1Q8NGY5 312 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 OR52P1PQ8NH57 321 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 FGFBP3Q8TAT2 258 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 NEURL3Q96EH8 262 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 TRNT1Q96Q11 434 aaKnown RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 GPA33Q99795 319 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 ULBP2Q9BZM5 246 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 SLITRK2Q9H156 845 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 MTHFD2LQ9H903 347 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 RNF121Q9H920 327 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 CDH20Q9HBT6 801 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 B3GAT2Q9NPZ5 323 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 B3GAT1Q9P2W7 334 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 SLC7A8Q9UHI5 535 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 GPR160Q9UJ42 338 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF281Q9Y2X9 895 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 AUP1Q9Y679 476 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 FAAHO00519 579 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 AIM2O14862 343 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 AKAP8O43823 692 aaKnown RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 HPRP00739 348 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 PRB2P02812 416 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 SHBGP04278 402 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 FGF4P08620 206 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 SBK2P0C263 348 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 FAM153BP0C7A2 387 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 GATA3P23771 443 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 SPANXN4Q5MJ08 99 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 SPATA46Q5T0L3 261 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 LRRC74BQ6ZQY2 392 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 TRMT10CQ7L0Y3 403 aaKnown RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 SERPINA11Q86U17 422 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 UEVLDQ8IX04 471 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF440Q8IYI8 595 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 TMEM123Q8N131 208 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 DEFB108BQ8NET1 73 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 MFSD8Q8NHS3 518 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 OIT3Q8WWZ8 545 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 TAAR8Q969N4 342 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 TXNDC15Q96J42 360 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF75AQ96N20 296 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 PTDSS2Q9BVG9 487 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 ZMAT3Q9HA38 289 aaKnown RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 PLEK2Q9NYT0 353 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF224Q9NZL3 707 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 RPS6KB2Q9UBS0 482 aa9.87□□□□□ -0.83
SDCBP-211ENST00000523441 LEF1Q9UJU2 399 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF443Q9Y2A4 671 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-211ENST00000523441 PRSS51A0A1B0GVH4 220 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 CDHR4A6H8M9 788 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF726A6NNF4 738 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 FTCDNL1E5RQL4 147 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 M0QZ24 198 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 TRAF3IP2O43734 574 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 UBL3O95164 117 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 CCNOP22674 350 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 GCH1P30793 250 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ARRB2P32121 409 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 SEC61A1P61619 476 aaKnown RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 SMU1Q2TAY7 513 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 PCGF3Q3KNV8 242 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ANXA8L1Q5VT79 327 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF621Q6ZSS3 439 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF584Q8IVC4 421 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 SKA3Q8IX90 412 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 C20orf196Q8IYI0 205 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 LRRC34Q8IZ02 419 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 C10orf53Q8N6V4 93 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 SLC30A7Q8NEW0 376 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 VPS37AQ8NEZ2 397 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 FAM110DQ8TAY7 271 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 EPS8L3Q8TE67 593 aaKnown RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 GEMIN6Q8WXD5 167 aaKnown RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 C11orf40Q8WZ69 217 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 POP5Q969H6 163 aaKnown RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 ELMOD3Q96FG2 381 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 FOXB1Q99853 325 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 SH3GL3Q99963 347 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 MRI1Q9BV20 369 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 MMP27Q9H306 513 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 DCAF16Q9NXF7 216 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 PURGQ9UJV8 347 aaKnown RBP9.86□□□□□ -0.83
SDCBP-211ENST00000523441 TRIM33Q9UPN9 1127 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 TANC2Q9HCD6 1990 aa9.86□□□□□ -0.83
SDCBP-211ENST00000523441 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 CCDC154A6NI56 674 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 TRAPPC2LH3BP13 241 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 HOXA3O43365 443 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-211ENST00000523441 NPHS1O60500 1241 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 NPIPB7O75200 414 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 SPAG7O75391 227 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 FOXH1O75593 365 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 CRYBA1P05813 215 aa9.85□□□□□ -0.83
SDCBP-211ENST00000523441 BCHEP06276 602 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms