RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 NET1Q7Z628 596 aaPredicted RBP22.22■■□□□ 1.15
PVT1-219ENST00000523427 C10orf53Q8N6V4 93 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 SGMS2Q8NHU3 365 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 FAM216AQ8WUB2 273 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 ITCHQ96J02 903 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 ZNF75AQ96N20 296 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 OR51B6Q9H340 312 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 KLHL14Q9P2G3 628 aa22.22■■□□□ 1.15
PVT1-219ENST00000523427 A0A087WUJ7 227 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 TMEM89A2RUT3 159 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 C5orf58C9J3I9 102 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 TM9SF1O15321 606 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 PNPP00491 289 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 AVPP01185 164 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 HTR2AP28223 471 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 LSP1P33241 339 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 HILS1P60008 231 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 RPS23P62266 143 aaKnown RBP22.21■■□□□ 1.15
PVT1-219ENST00000523427 MYBPC1Q00872 1141 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 C6orf89Q6UWU4 347 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 C1orf229Q6ZS94 237 aaPredicted RBP22.21■■□□□ 1.15
PVT1-219ENST00000523427 RMND5AQ9H871 391 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 ZNF224Q9NZL3 707 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 MEGF8Q7Z7M0 2845 aa22.21■■□□□ 1.15
PVT1-219ENST00000523427 TRAV20A0A0B4J274 112 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 LOC102725191A0A1B0GVB3 256 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 ZCCHC18P0CG32 403 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 FAM157BP0CG42 384 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 AHCYP23526 432 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 COMPP49747 757 aaPredicted RBP22.2■■□□□ 1.14
PVT1-219ENST00000523427 PMS2P3Q13401 168 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 FXNQ16595 210 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 C5orf46Q6UWT4 87 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 FOXB1Q99853 325 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 ZNF416Q9BWM5 594 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 ASPNQ9BXN1 380 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 THUMPD1Q9NXG2 353 aaKnown RBP22.2■■□□□ 1.14
PVT1-219ENST00000523427 TAAR3PQ9P1P4 343 aa22.2■■□□□ 1.14
PVT1-219ENST00000523427 LRRN3E7EW58 273 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 HDAC3O15379 428 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 MPZL1O95297 269 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 IDO1P14902 403 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 RGNQ15493 299 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 PDCD4Q53EL6 469 aaKnown RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 COMTD1Q86VU5 262 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 ANKRD42Q8N9B4 389 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 OR9I1Q8NGQ6 314 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 BBS10Q8TAM1 723 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 AENQ8WTP8 325 aaKnown RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 DNAJA4Q8WW22 397 aaPredicted RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 TMEM109Q9BVC6 243 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 RBM4Q9BWF3 364 aaKnown RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 RSPO3Q9BXY4 272 aaPredicted RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 C12orf10Q9HB07 376 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 SELENONQ9NZV5 590 aa22.19■■□□□ 1.14
PVT1-219ENST00000523427 ZNF346Q9UL40 294 aaKnown RBP22.19■■□□□ 1.14
PVT1-219ENST00000523427 TRPC5OSA6NMA1 111 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 RP2O75695 350 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 CLPTM1O96005 669 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 ADRA2CP18825 462 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 CCL8P80075 99 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 ZNF771Q7L3S4 317 aaPredicted RBP22.18■■□□□ 1.14
PVT1-219ENST00000523427 SKA3Q8IX90 412 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 FGFBP3Q8TAT2 258 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 LRR1Q96L50 414 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 MOGAT1Q96PD6 335 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 BCL2L10Q9HD36 194 aa22.18■■□□□ 1.14
PVT1-219ENST00000523427 CLIC1O00299 241 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 FZD7O75084 574 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 UBL3O95164 117 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 CCL2P13500 99 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 CSNK1A1P48729 337 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 NCALDP61601 193 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 HHATQ5VTY9 493 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 RGS7BPQ6MZT1 257 aaPredicted RBP22.17■■□□□ 1.14
PVT1-219ENST00000523427 ACSM5Q6NUN0 579 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 SNX32Q86XE0 403 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 LSMEM1Q8N8F7 131 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 ADPRHL1Q8NDY3 354 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 NFKBIDQ8NI38 313 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 SLC35B4Q969S0 331 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 SLC47A1Q96FL8 570 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 TSPAN32Q96QS1 320 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 JMJD8Q96S16 334 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 SLC6A7Q99884 636 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 ZNF665Q9H7R5 613 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 A4GALTQ9NPC4 353 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 SLC7A8Q9UHI5 535 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 CORINQ9Y5Q5 1042 aa22.17■■□□□ 1.14
PVT1-219ENST00000523427 C11orf98E9PRG8 122 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 TPD52L2O43399 206 aaKnown RBP22.16■■□□□ 1.14
PVT1-219ENST00000523427 PLPP2O43688 288 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 TPST1O60507 370 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 BGLAPP02818 100 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 ANPEPP15144 967 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 POLR2JP52435 117 aaKnown RBP22.16■■□□□ 1.14
PVT1-219ENST00000523427 PUDPQ08623 228 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 TMEM154Q6P9G4 183 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 ULK3Q6PHR2 472 aa22.16■■□□□ 1.14
PVT1-219ENST00000523427 SLC2A7Q6PXP3 512 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms