RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MBOAT4Q96T53 435 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 TM9SF2Q99805 663 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 KATNB1Q9BVA0 655 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 NDEL1Q9GZM8 345 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 TOR3AQ9H497 397 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 MED29Q9NX70 200 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 KLHL9Q9P2J3 617 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ADAM18Q9Y3Q7 739 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ORC6Q9Y5N6 252 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 NOX1Q9Y5S8 564 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 FLVCR1Q9Y5Y0 555 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 UTP20O75691 2785 aaKnown RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 A0A1W2PRG6 482 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 ZNF724A8MTY0 619 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 EEF1E1-BLOC1S5C9J1V9 151 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 E9PQ18 207 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 BHLHE40O14503 412 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 EEF1E1O43324 174 aaKnown RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 IGHMP01871 453 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 COX6B1P14854 86 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 IFNGR1P15260 489 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 CDH2P19022 906 aaPredicted RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 CTSSP25774 331 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 NTF4P34130 210 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 SIRPAP78324 504 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 CDK5Q00535 292 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 FOXF2Q12947 444 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TOP3AQ13472 1001 aaPredicted RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 MELKQ14680 651 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 GINS1Q14691 196 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 GUSBP1Q15486 140 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TAF11Q15544 211 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 ACKR1Q16570 336 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 EEF1A1P5Q5VTE0 462 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 GTF2IRD2BQ6EKJ0 949 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 SLC35D2Q76EJ3 337 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 FAM122BQ7Z309 247 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 GTF2IRD2Q86UP8 949 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TUSC5Q8IXB3 177 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 OR52L1Q8NGH7 329 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 GMPPAQ96IJ6 420 aaPredicted RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 ZNF570Q96NI8 536 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 RDH12Q96NR8 316 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TSPAN32Q96QS1 320 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 IFT27Q9BW83 186 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 POLDIP3Q9BY77 421 aaKnown RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 VCXQ9H320 206 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 VCX3BQ9H321 246 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 TXNIPQ9H3M7 391 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 NRIP3Q9NQ35 241 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 SMPD3Q9NY59 655 aaPredicted RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 ENOPH1Q9UHY7 261 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 ZNF346Q9UL40 294 aaKnown RBP10.58□□□□□ -0.72
PVT1-215ENST00000522963 IER3IP1Q9Y5U9 82 aa10.58□□□□□ -0.72
PVT1-215ENST00000522963 MPDZO75970 2070 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 NPIPB13A6NJU9 1138 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ZAR1LA6NP61 321 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 NPIPB4C9JG80 1138 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 TXNDC12O95881 172 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 BCL10O95999 233 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 YES1P07947 543 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 APEHP13798 732 aaKnown RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 VHLP40337 213 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 GIPRP48546 466 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 AQP4P55087 323 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 BIDP55957 195 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 CLDN17P56750 224 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 SNTB1Q13884 538 aaKnown RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 PTGES3Q15185 160 aaKnown RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 PGGHGQ32M88 737 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 SLC25A35Q3KQZ1 300 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ARMC4Q5T2S8 1044 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ACSM5Q6NUN0 579 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 NUFIP2Q7Z417 695 aaKnown RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 RELL2Q8NC24 303 aaPredicted RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 OR2T33Q8NG76 320 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ZNF519Q8TB69 540 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ASB10Q8WXI3 467 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 Q96M85 177 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 ERMAPQ96PL5 475 aaPredicted RBP10.57□□□□□ -0.72
PVT1-215ENST00000522963 EMC6Q9BV81 110 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 GRIP2Q9C0E4 1043 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 SLC25A19Q9HC21 320 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 GP6Q9HCN6 339 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 GLRX2Q9NS18 164 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 EMC3Q9P0I2 261 aa10.57□□□□□ -0.72
PVT1-215ENST00000522963 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 TEX13CA0A0J9YWL9 993 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 H0YJX3 145 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 GPR171O14626 319 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 IMPA2O14732 288 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 ARPC3O15145 178 aa10.56□□□□□ -0.72
PVT1-215ENST00000522963 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
PVT1-215ENST00000522963 EDNRAP25101 427 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms