RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SSX6Q7RTT6 188 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 MCOLN2Q8IZK6 566 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OR2Y1Q8NGV0 311 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OR6K2Q8NGY2 324 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OPTNQ96CV9 577 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 MED30Q96HR3 178 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 ITCHQ96J02 903 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 TBX15Q96SF7 602 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 RBBP8Q99708 897 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 UPF3AQ9H1J1 476 aaKnown RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 TUBB1Q9H4B7 451 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 ARMC7Q9H6L4 198 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 CWH43Q9H720 699 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 NT5DC2Q9H857 520 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 FKRPQ9H9S5 495 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 INTS9Q9NV88 658 aaKnown RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 C1orf109Q9NX04 203 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OCIAD1Q9NX40 245 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 KLK11Q9UBX7 282 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 CYB5R1Q9UHQ9 305 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 KCNG2Q9UJ96 466 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 SAMHD1Q9Y3Z3 626 aaKnown RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 EVPLQ92817 2033 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 FER1L5A0AVI2 2057 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 IGHV4-61A0A0C4DH41 118 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 A0A1B0GW55 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 TSPAN11A1L157 253 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SAGE2PA6NJ88 616 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SOX15O60248 233 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 CLDN11O75508 207 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 TDP2O95551 362 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 IGHV4-59P01825 116 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SERPINA5P05154 406 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 RHOCP08134 193 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ACSM4P0C7M7 580 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L2P0CJ85 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L3P0CJ86 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L4P0CJ87 422 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L5P0CJ88 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L6P0CJ89 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L7P0CJ90 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 CALML3P27482 149 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 CEACAM8P31997 349 aaPredicted RBP3.37□□□□□ -1.87
SKP1-209ENST00000522552 RFC3P40938 356 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 GSSP48637 474 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 LIM2P55344 173 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 NUP107P57740 925 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ARPC4P59998 168 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SLC35B1P78383 322 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 Q0VFX4 171 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DLG1Q12959 904 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 GAGE5Q13069 117 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 GAGE6Q13070 117 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ZNF154Q13106 437 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 MED21Q13503 144 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 PGGHGQ32M88 737 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ACTBL2Q562R1 376 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ANKRD26P1Q6NSI1 321 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ZNF549Q6P9A3 640 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4L9Q6RFH8 374 aaPredicted RBP3.37□□□□□ -1.87
SKP1-209ENST00000522552 PRSS57Q6UWY2 283 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 STOX1Q6ZVD7 989 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 C16orf82Q7Z2V1 217 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ABHD12Q8N2K0 398 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 MTURNQ8N3F0 131 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 MREGQ8N565 214 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 C19orf18Q8NEA5 215 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 OR5D18Q8NGL1 313 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 OR9A4Q8NGU2 314 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 MPLKIPQ8TAP9 179 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ITFG1Q8TB96 612 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 GATAD1Q8WUU5 269 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 HPSE2Q8WWQ2 592 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 IL1F10Q8WWZ1 152 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 CYP2S1Q96SQ9 504 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 NICN1Q9BSH3 213 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 TOLLIPQ9H0E2 274 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SAMSN1Q9NSI8 373 aaKnown RBP3.37□□□□□ -1.87
SKP1-209ENST00000522552 DUX4Q9UBX2 424 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 SEC14L4Q9UDX3 406 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 WARS2Q9UGM6 360 aaKnown RBP3.37□□□□□ -1.87
SKP1-209ENST00000522552 POU2F3Q9UKI9 436 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 ICAM5Q9UMF0 924 aa3.37□□□□□ -1.87
SKP1-209ENST00000522552 USP42Q9H9J4 1324 aaKnown RBP3.37□□□□□ -1.87
SKP1-209ENST00000522552 GLYATL1P3A0A0U1RQE8 302 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 PSMB11A5LHX3 300 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 SRRM3A6NNA2 597 aaPredicted RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 H3BNX3 289 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 CCL21O00585 134 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 EEDO75530 441 aaKnown RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 C1QL1O75973 258 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 GJB5O95377 273 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 NADKO95544 446 aaPredicted RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 TIMP1P01033 207 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 HBE1P02100 147 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 WNT2P09544 360 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 TACSTD2P09758 323 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms