RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLC17A1Q14916 467 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 MESTQ5EB52 335 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF362Q5T0B9 420 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 SLC35F1Q5T1Q4 408 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ARMC4Q5T2S8 1044 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 NXNL2Q5VZ03 156 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 TMEM225Q6GV28 225 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 LAIR2Q6ISS4 152 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 SLC35D2Q76EJ3 337 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 FCRLAQ7L513 359 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 VASH1Q7L8A9 365 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 CXXC5Q7LFL8 322 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 JAZF1Q86VZ6 243 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 GID4Q8IVV7 300 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF786Q8N393 782 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 SLC37A3Q8NCC5 494 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ASB10Q8WXI3 467 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 UBE2FQ969M7 185 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 RASD2Q96D21 266 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF845Q96IR2 970 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 LRR1Q96L50 414 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 IL4I1Q96RQ9 567 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 HINT3Q9NQE9 182 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF346Q9UL40 294 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 BLOC1S6Q9UL45 172 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 CAMK2AQ9UQM7 478 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 PCDHGB5Q9Y5G0 923 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF407Q9C0G0 2248 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 IGKV3D-15A0A087WSY6 115 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 IGHV3-15A0A0B4J1V0 119 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF716A6NP11 495 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 CENPBD1B2RD01 187 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 PRR23D1E9PI22 279 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-205ENST00000522240 NPIPA2E9PIF3 369 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 NPIPA3F8WFD2 350 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 XKRYO14609 159 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 PRODHO43272 600 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 TLX2O43763 284 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-205ENST00000522240 AHCYL1O43865 530 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 SERPINI2O75830 405 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 SLC2A10O95528 541 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 BCL10O95999 233 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 PRR23D2P0DMB1 279 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-205ENST00000522240 FCGR2AP12318 317 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 HLA-DOBP13765 273 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 IFNGR1P15260 489 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 TDGF1P3P51864 188 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 ITGADQ13349 1161 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
CPNE3-205ENST00000522240 AADACL4Q5VUY2 407 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 CHMP1BQ7LBR1 199 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 ADGRE4PQ86SQ3 457 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 KDM8Q8N371 416 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 OR9K2Q8NGE7 335 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 OR52E2Q8NGJ4 325 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 ZPLD1Q8TCW7 415 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 FAR1Q8WVX9 515 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 RFKQ969G6 155 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 SLX1AQ9BQ83 275 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 TUBA1CQ9BQE3 449 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF696Q9H7X3 374 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 RNF122Q9H9V4 155 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 DNAJC27Q9NZQ0 273 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 VSX1Q9NZR4 365 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-205ENST00000522240 KLHL9Q9P2J3 617 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 RCE1Q9Y256 329 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 GPR52Q9Y2T5 361 aa11.64□□□□□ -0.55
CPNE3-205ENST00000522240 A0A1B0GTH9 108 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 GPR171O14626 319 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 RENP00797 406 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 NR2C1P13056 603 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 ACVR2AP27037 513 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 FMO3P31513 532 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 ACVR1BP36896 505 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 SLC25A1P53007 311 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 TMED1Q13445 227 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 MELKQ14680 651 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 PON3Q15166 354 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 RNPS1Q15287 305 aaKnown RBP11.63□□□□□ -0.55
CPNE3-205ENST00000522240 SF3B4Q15427 424 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE3-205ENST00000522240 C3AR1Q16581 482 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 NIPAL3Q6P499 406 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 LEG1Q6P5S2 330 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 CREB3L2Q70SY1 520 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF582Q96NG8 517 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-205ENST00000522240 DDOQ99489 341 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 ALG12Q9BV10 488 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms