RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CHRM4P08173 479 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 CISD3P0C7P0 127 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 RAB6AP20340 208 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 DBPQ10586 325 aaPredicted RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 FCN2Q15485 313 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 SMN1Q16637 294 aaKnown RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 HLA-BQ31612 363 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 CD300LGQ6UXG3 332 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 PHYHIPQ92561 330 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 VN1R3Q9BXE9 311 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 FAM212BQ9NTI7 297 aaPredicted RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 NPFFR2Q9Y5X5 522 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 ZNF705GA8MUZ8 300 aaPredicted RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 SULT1C4O75897 302 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 F13BP05160 661 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 MEX3DQ86XN8 651 aaKnown RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 ETFBKMTQ8IXQ9 262 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 SLC43A2Q8N370 569 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 LILRB2Q8N423 598 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 OR1J2Q8NGS2 313 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 OR13C2Q8NGS9 318 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 CDK5RAP2Q96SN8 1893 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 TSPAN11A1L157 253 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 STMND1H3BQB6 276 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 AGPAT2O15120 278 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 DAPP51397 102 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 CAV2P51636 162 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 SORDQ00796 357 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 VASNQ6EMK4 673 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 DHRS4L2Q6PKH6 230 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 LANCL3Q6ZV70 420 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 ZNF679Q8IYX0 411 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 LMF1Q96S06 567 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 RPP25Q9BUL9 199 aaKnown RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 KATNB1Q9BVA0 655 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 TMEM269A0A1B0GVZ9 245 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 G3V3Y1 287 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 MT-CO2P00403 227 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 NME1P15531 152 aaKnown RBP14.91□□□□□ -0.02
USP42-207ENST00000521713 NKPD1Q17RQ9 610 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CYHR1Q6ZMK1 362 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TMEM200AQ86VY9 491 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 C10orf90Q96M02 699 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 DYNLRB1Q9NP97 96 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 ZNF225Q9UK10 706 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TMEM184BQ9Y519 407 aaPredicted RBP14.91□□□□□ -0.02
USP42-207ENST00000521713 SLC22A23A1A5C7 686 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 OR6C76A6NM76 312 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TPPPO94811 219 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CLDN17P56750 224 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TEKQ02763 1124 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 KCNIP4Q6PIL6 250 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 PRRX2Q99811 253 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CENPOQ9BU64 300 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 PLA2G2FQ9BZM2 168 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 HRH4Q9H3N8 390 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 MUTYHQ9UIF7 546 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 KLK8O60259 260 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 FADS1O60427 444 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 B3GALT4O96024 378 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CD22P20273 847 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 SLC2A5P22732 501 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CXADRP78310 365 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 PRSS36Q5K4E3 855 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CAMKMTQ7Z624 323 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TRAPPC6BQ86SZ2 158 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 PELI3Q8N2H9 469 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 MORN4Q8NDC4 146 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 OR4M1Q8NGD0 313 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 ANGPTL6Q8NI99 470 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 NUDT22Q9BRQ3 303 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 TUBB1Q9H4B7 451 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 PPIL1Q9Y3C6 166 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 KDM4EB2RXH2 506 aaPredicted RBP14.91□□□□□ -0.02
USP42-207ENST00000521713 KIAA0907Q7Z7F0 614 aaPredicted RBP14.91□□□□□ -0.02
USP42-207ENST00000521713 SLC35F3Q8IY50 421 aa14.91□□□□□ -0.02
USP42-207ENST00000521713 CDX2Q99626 313 aaPredicted RBP14.91□□□□□ -0.02
USP42-207ENST00000521713 A0A1W2PR48 441 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 MED6O75586 246 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 HLA-AP01891 365 aaKnown RBP14.9□□□□□ -0.02
USP42-207ENST00000521713 S100A8P05109 93 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 RAC2P15153 192 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 GRINAQ7Z429 371 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 TMEM100Q9NV29 134 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 SIDT1Q9NXL6 827 aaKnown RBP14.9□□□□□ -0.02
USP42-207ENST00000521713 POMT2Q9UKY4 750 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 OR51B4Q9Y5P0 310 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 DCDC2BA2VCK2 349 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 PIAS2O75928 621 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 BATFQ16520 125 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 ZNF750Q32MQ0 723 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 ABHD5Q8WTS1 349 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 TRDV1A0A1B0GX56 115 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 J3KTA2 159 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 TOR1AO14656 332 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 MPIG6BO95866 241 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 GYPBP06028 91 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms