RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 UBE2J2Q8N2K1 259 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 ZNF519Q8TB69 540 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 SLC7A13Q8TCU3 470 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 C20orf141Q9NUB4 165 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 B3GNT2Q9NY97 397 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 C6orf203Q9P0P8 240 aaPredicted RBP8.29□□□□□ -1.08
CLK4-209ENST00000521621 RNF115Q9Y4L5 304 aa8.29□□□□□ -1.08
CLK4-209ENST00000521621 SLC35F4A4IF30 521 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 LYZL6O75951 148 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 CD3EP07766 207 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 FPR3P25089 353 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ARR3P36575 388 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZNF672Q499Z4 452 aaPredicted RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZBED5Q49AG3 693 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 RPL13AP3Q6NVV1 102 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 TMEM108Q6UXF1 575 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZNF704Q6ZNC4 412 aaPredicted RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 NOXO1Q8NFA2 376 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 OR4C15Q8NGM1 316 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZNF566Q969W8 418 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 GLTPQ9NZD2 209 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 RNF13O43567 381 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 IDH3BO43837 385 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 UTP20O75691 2785 aaKnown RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 DNAJC8O75937 253 aaPredicted RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 UBOX5O94941 541 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 IGHG1P01857 330 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 IFI30P13284 250 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 HLA-DOBP13765 273 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ACADSP16219 412 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 CD53P19397 219 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 MAKP20794 623 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 PTDSS1P48651 473 aaKnown RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 CSNK1A1P48729 337 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 TBRG1Q3YBR2 411 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 CD300LDQ6UXZ3 194 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZNF730Q6ZMV8 503 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 DTX2Q86UW9 622 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 NRMQ8IXM6 262 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 C10orf53Q8N6V4 93 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 FAM86B1Q8N7N1 296 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 LILRB1Q8NHL6 650 aaPredicted RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 C1orf198Q9H425 327 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 ZNF701Q9NV72 531 aaPredicted RBP8.28□□□□□ -1.08
CLK4-209ENST00000521621 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 MPDZO75970 2070 aa8.28□□□□□ -1.08
CLK4-209ENST00000521621 CIB4A0PJX0 185 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 DPRXA6NFQ7 191 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 J3KTA2 159 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 BCL10O95999 233 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 RAP2AP10114 183 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 IFNGR1P15260 489 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 ATP6V1B2P21281 511 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 GSSP48637 474 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 RPL27P61353 136 aaKnown RBP8.27□□□□□ -1.08
CLK4-209ENST00000521621 ALG10Q5BKT4 473 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 THEM4Q5T1C6 240 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 ZNF544Q6NX49 715 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 P3H2Q8IVL5 708 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 LRRC17Q8N6Y2 441 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.08
CLK4-209ENST00000521621 PIK3IP1Q96FE7 263 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 ZNF75AQ96N20 296 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 GSX2Q9BZM3 304 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 SIGLEC7Q9Y286 467 aa8.27□□□□□ -1.08
CLK4-209ENST00000521621 HECTD1Q9ULT8 2610 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 A0A1W2PPR1 153 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 TCRBV3S1A0A5B6 114 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 SHISA9B4DS77 424 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 OVOL3O00110 214 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ARPC3O15145 178 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 PDE5AO76074 875 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 UBL3O95164 117 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 STAMBPO95630 424 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 NPR2P20594 1047 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 CD40P25942 277 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 HOXC12P31275 282 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 FAM98BQ52LJ0 330 aaKnown RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 ZNF770Q6IQ21 691 aaPredicted RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 SLC25A47Q6Q0C1 308 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 DPY19L2P2Q6ZN68 376 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 FAM122BQ7Z309 247 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ZDHHC21Q8IVQ6 265 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 NUP37Q8NFH4 326 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ZNF775Q96BV0 537 aaPredicted RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 TXNDC15Q96J42 360 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 DGCR6LQ9BY27 220 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 LRRN3E7EW58 273 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 GYG2O15488 501 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 CLOCKO15516 846 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ICMTO60725 284 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 RAD51DO75771 328 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms