RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DERL3Q96Q80 235 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SLC19A3Q9BZV2 496 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GPN1Q9HCN4 374 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 ABRACLQ9P1F3 81 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ALG5Q9Y673 324 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GPR179Q6PRD1 2367 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 LTBP2Q14767 1821 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 A0A1B0GTH9 108 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 C17orf51A8MQB3 221 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EIF4E2O60573 245 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 ZNF43P17038 809 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SDHBP21912 280 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EPHA4P54764 986 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 RNF4P78317 190 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 BDH1Q02338 343 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ZNF85Q03923 595 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ALKBH1Q13686 389 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 TMEM176BQ3YBM2 270 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SLC35D3Q5M8T2 416 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GLT8D1Q68CQ7 371 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GRINAQ7Z429 371 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 MRPS18AQ9NVS2 196 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 COA3Q9Y2R0 106 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 WDR87Q6ZQQ6 2873 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 FAM25EA8MYX2 175 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SEC14L5O43304 696 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ADAM11O75078 769 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 AKR7A3O95154 331 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 JMJD7P0C870 316 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 TBXA2RP21731 343 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ASAH1Q13510 395 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.24□□□□□ -0.93
MCF2-209ENST00000520602 Q499Y3 187 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 RNLSQ5VYX0 342 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 TMEM71Q6P5X7 295 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 TMEM91Q6ZNR0 172 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 KANSL1Q7Z3B3 1105 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 KCTD20Q7Z5Y7 419 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 UEVLDQ8IX04 471 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 PIAS4Q8N2W9 510 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 RFLNBQ8N5W9 214 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ARIH2OSQ8N7S6 290 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ASCC1Q8N9N2 400 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 OR5H6Q8NGV6 325 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GCDHQ92947 438 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 LIN7BQ9HAP6 207 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 KCNG2Q9UJ96 466 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 V9GYH0 126 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 C4orf47A7E2U8 309 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 B4DXG7 233 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 PHYHO14832 338 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 PTP4A3O75365 173 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 GTF2F2P13984 249 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 IFNGR1P15260 489 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 RBMS1P29558 406 aaKnown RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 KIR2DL3P43628 341 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 HTR3AP46098 478 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 CAMK2DQ13557 499 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ZNF79Q15937 498 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 HLA-BQ31612 363 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 FAM199XQ6PEV8 388 aaPredicted RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 SLC43A2Q8N370 569 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ZNF283Q8N7M2 679 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ZPLD1Q8TCW7 415 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 MED29Q9NX70 200 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 MED12Q93074 2177 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 A0A1B0GVI7 797 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 TMEM269A0A1B0GVZ9 245 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 TFP02787 698 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 IFNA6P05013 189 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 CCR6P51684 374 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 RPL27P61353 136 aaKnown RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 SPOCK1Q08629 439 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 MFSD13AQ14CX5 517 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SIAH3Q8IW03 269 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SYS1Q8N2H4 156 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SLC25A45Q8N413 288 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 NAXEQ8NCW5 288 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 TMEM43Q9BTV4 400 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 RNF32Q9H0A6 362 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 EXO5Q9H790 373 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ANKRD10Q9NXR5 420 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 KLHL9Q9P2J3 617 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 TBC1D24Q9ULP9 559 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ARID1AO14497 2285 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SULT2B1O00204 365 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 PLPP2O43688 288 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms