RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 LOXL1Q08397 574 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 LARS2Q15031 903 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HIKESHIQ53FT3 197 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 C1orf140Q5VVS0 124 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 PRAMEF8Q5VWM4 474 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 PRAMEF7Q5VXH5 474 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 TMEM225Q6GV28 225 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 PGM2L1Q6PCE3 622 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 CLEC2AQ6UVW9 174 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 CREB3L2Q70SY1 520 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 SERPINA11Q86U17 422 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 OR9I1Q8NGQ6 314 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 SPATA3Q8NHX4 192 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HTRA1Q92743 480 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 GTF2H4Q92759 462 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 SLC35B4Q969S0 331 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 VPS33AQ96AX1 596 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 TNFRSF13CQ96RJ3 184 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 TAPBPLQ9BX59 468 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 RSPO3Q9BXY4 272 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 PAIP1Q9H074 479 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 RMND5AQ9H871 391 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 BCL2L10Q9HD36 194 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 OBP2BQ9NPH6 170 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 BATF3Q9NR55 127 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 ADPRHL2Q9NX46 363 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 THUMPD1Q9NXG2 353 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 RASD1Q9Y272 281 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 IFT52Q9Y366 437 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 A0A096LPI6 279 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 A8MV72 311 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 FTCDNL1E5RQL4 147 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ATP6V1G2-DDX39BF2Z307 99 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 FZD7O75084 574 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 UPK3AO75631 287 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ANP32DO95626 131 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 LGI1O95970 557 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 HOXB9P17482 250 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 CDH2P19022 906 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MRPL19P49406 292 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 EFNA4P52798 201 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 AQP5P55064 265 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 VLDLRP98155 873 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 HOXC5Q00444 222 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 EGR4Q05215 589 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 LGALS3BPQ08380 585 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 RGNQ15493 299 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 TMEM249Q2WGJ8 235 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 TBRG1Q3YBR2 411 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ZNF311Q5JNZ3 666 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 C6orf10Q5SRN2 563 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 HMBOX1Q6NT76 420 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 EPGNQ6UW88 154 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 LINGO2Q7L985 606 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ABHD12BQ7Z5M8 362 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 GPAT4Q86UL3 456 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MIER2Q8N344 545 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 ZNF525Q8N782 197 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 OR1K1Q8NGR3 316 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MFSD8Q8NHS3 518 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MAGEE2Q8TD90 523 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MAL2Q969L2 176 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 LRRC37BQ96QE4 947 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 PTDSS2Q9BVG9 487 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 A4GALTQ9NPC4 353 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 TMEM45AQ9NWC5 275 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 CRNNQ9UBG3 495 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 MOKQ9UQ07 419 aa8.07□□□□□ -1.12
CTNNA1-221ENST00000520339 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 ARPC4-TTLL3A0A0A6YYG9 625 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 IGHV1-18A0A0C4DH31 117 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 OR6C65A6NJZ3 312 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 ZNF587BE7ETH6 402 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 CLIC1O00299 241 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 ZNF432O94892 652 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 AHSA1O95433 338 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 PNMTP11086 282 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 SLC25A16P16260 332 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 NCF2P19878 526 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 PIN1Q13526 163 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 C6orf52Q5T4I8 152 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 NIPAL3Q6P499 406 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 ANKRD16Q6P6B7 361 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 SLC2A7Q6PXP3 512 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 KLHL24Q6TFL4 600 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 FUNDC1Q8IVP5 155 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 MSRB3Q8IXL7 192 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 KDM8Q8N371 416 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 C17orf50Q8WW18 174 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 STON2Q8WXE9 905 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 PROX1Q92786 737 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 KTI12Q96EK9 354 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 C16orf92Q96LL3 132 aa8.06□□□□□ -1.12
CTNNA1-221ENST00000520339 SLC38A2Q96QD8 506 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms