RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 A0A0G2JMM0 328 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 A0A1W2PPB8 328 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 A0A1W2PRS3 328 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PINLYPA6NC86 204 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 FRG2CA6NGY1 282 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 TRPC5OSA6NMA1 111 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 FAM166BA8MTA8 275 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 KIR3DP1A8MWS1 328 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SLCO1B7G3V0H7 640 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 UPK1AO00322 258 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PLOD2O00469 737 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 KLF11O14901 512 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 TFECO14948 347 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SCAMP2O15127 329 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 TO15178 435 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 HDAC3O15379 428 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SNNO75324 88 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 NME6O75414 186 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 LAMP1P11279 417 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 ZNF23P17027 643 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 LBPP18428 481 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 DNASE1L1P49184 302 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 DIO3P55073 304 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 DLX5P56178 289 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 FBXW4P57775 412 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PPIAP62937 165 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 KCNJ2P63252 427 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PSPHP78330 225 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RPP38P78345 283 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RPL36AP83881 106 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RBPJQ06330 500 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PLCXD2Q0VAA5 305 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 HSPB3Q12988 150 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 ZNF672Q499Z4 452 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PRAMEF20Q5VT98 475 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RGS9BPQ6ZS82 235 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 C9orf139Q6ZV77 190 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 NUP54Q7Z3B4 507 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SLC22A16Q86VW1 577 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SIAH3Q8IW03 269 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 PRR22Q8IZ63 422 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 OR2L13Q8N349 312 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 FBXW8Q8N3Y1 598 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 KRTCAP2Q8N6L1 136 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 RBM15BQ8NDT2 890 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 OR7A2PQ8NGA2 310 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SPPL2AQ8TCT8 520 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 ZNF75CPQ92670 426 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 VSTM2LQ96N03 204 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 GPR137Q96N19 417 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 BTBD9Q96Q07 612 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 SECISBP2Q96T21 854 aaKnown RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 DOHHQ9BU89 302 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 KRTAP1-5Q9BYS1 174 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 MEAF6Q9HAF1 191 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 IL1RL2Q9HB29 575 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 FOLH1BQ9HBA9 442 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 ATAD3AQ9NVI7 634 aa6.13□□□□□ -1.43
SDCBP-208ENST00000520228 MARCOQ9UEW3 520 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 CHCHD2Q9Y6H1 151 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-208ENST00000520228 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 A0A1B0GUH1 482 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 A0A1W2PRB8 838 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 LRRTM2O43300 516 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 BUB3O43684 328 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CDC40O60508 579 aaKnown RBP eCLIP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 SLC19A2O60779 497 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 REM1O75628 298 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 PDE9AO76083 593 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 GLSO94925 669 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 SNX4O95219 450 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 ABCB1P08183 1280 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 STSP08842 583 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 IFI6P09912 130 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CT45A8P0DMV1 189 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CT45A9P0DMV2 189 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 EFNA1P20827 205 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 KRT20P35900 424 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 FRKP42685 505 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 RAD52P43351 418 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CDK9P50750 372 aaKnown RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CLDN8P56748 225 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CD81P60033 236 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CT45A2Q5DJT8 189 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 PLXDC2Q6UX71 529 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 CLEC18BQ6UXF7 455 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 NPSR1Q6W5P4 371 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 SPATA19Q7Z5L4 167 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 RIMKLAQ8IXN7 391 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 LRRC34Q8IZ02 419 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 SLC34A3Q8N130 599 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 NATD1Q8N6N6 113 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 LRRC8CQ8TDW0 803 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 DYDC1Q8WWB3 177 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 OR5P2Q8WZ92 322 aa6.12□□□□□ -1.43
SDCBP-208ENST00000520228 USP9XQ93008 2570 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-208ENST00000520228 TMBIM1Q969X1 311 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms