RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MYLK4Q86YV6 388 aaPredicted RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 LMNTD2Q8IXW0 634 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 FAM9CQ8IZT9 166 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 OR5AU1Q8NGC0 362 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 OR5R1Q8NH85 324 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 GPR151Q8TDV0 419 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 TRPC4APQ8TEL6 797 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 NSMAFQ92636 917 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 ELP4Q96EB1 424 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 GIMAP5Q96F15 307 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 ARHGDIGQ99819 225 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 CDCA4Q9BXL8 241 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 CNOT10Q9H9A5 744 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 GPR35Q9HC97 309 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 MOV10Q9HCE1 1003 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 MSL2Q9HCI7 577 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 XAB2Q9HCS7 855 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC35C2Q9NQQ7 365 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SLCO1C1Q9NYB5 712 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 MRTO4Q9UKD2 239 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 PSME2Q9UL46 239 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 FAM96BQ9Y3D0 163 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 TANC2Q9HCD6 1990 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 NPIPB9F8W1W9 429 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 DNPH1O43598 174 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 SYNGR1O43759 233 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 AKR7A3O95154 331 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 RBMY1A1P0DJD3 496 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 CD79AP11912 226 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 FAHP16930 419 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 CCNA2P20248 432 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 MAGEA3P43357 314 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 PTDSS1P48651 473 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 AQP5P55064 265 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 ARF6P62330 175 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 RAE1P78406 368 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 NPTX1Q15818 432 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 GSG1Q2KHT4 349 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 CEACAM16Q2WEN9 425 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 RUNDC3AQ59EK9 446 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 NIPAL3Q6P499 406 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 CREB3L2Q70SY1 520 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 ABHD12BQ7Z5M8 362 aaPredicted RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 TCAIMQ8N3R3 496 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 TEX9Q8N6V9 391 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 ZNF519Q8TB69 540 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 CALML6Q8TD86 181 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 ZHX1-C8orf76Q96EF9 292 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 NEIL1Q96FI4 390 aaPredicted RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 SERPINI1Q99574 410 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 NKX3-1Q99801 234 aaPredicted RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 DCTN5Q9BTE1 182 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 THUMPD3Q9BV44 507 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 LINC00470Q9BZP3 86 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 TSGA10Q9BZW7 698 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 GLIPR2Q9H4G4 154 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 FARSBQ9NSD9 589 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 ACER3Q9NUN7 267 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 TMEM181Q9P2C4 612 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC7A8Q9UHI5 535 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 GPR160Q9UJ42 338 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 HDGFL3Q9Y3E1 203 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 PSAT1Q9Y617 370 aa5.42□□□□□ -1.54
CTNNA1-216ENST00000519489 TCRBV4S1A1TA0A5B7 111 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 K7EPI3 171 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 RGS13O14921 159 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 ENSAO43768 121 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 BANF1O75531 89 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 THY1P04216 161 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 LCKP06239 509 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 HCKP08631 526 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 THBS3P49746 956 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 BMXP51813 675 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 SH3BGRP55822 239 aaPredicted RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 KLRD1Q13241 179 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 SKP2Q13309 424 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 CDKL4Q5MAI5 379 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 SPATA46Q5T0L3 261 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 TEDDM1Q5T9Z0 273 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 FAM45BPQ6NSW5 357 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 PIWIL3Q7Z3Z3 882 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 MTERF4Q7Z6M4 381 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 RNF130Q86XS8 419 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 FAM45AQ8TCE6 357 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 EXT2Q93063 718 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 COQ8BQ96D53 544 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 C3orf30Q96M34 536 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 FRG2BQ96QU4 278 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 DDX18Q9NVP1 670 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 GRHL1Q9NZI5 618 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 CD274Q9NZQ7 290 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 KIAA1456Q9P272 454 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 CTSZQ9UBR2 303 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 DNAJB11Q9UBS4 358 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 CHRNA9Q9UGM1 479 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 KCNE5Q9UJ90 142 aa5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 PACSIN2Q9UNF0 486 aaPredicted RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 TRAPPC4Q9Y296 219 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms