RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 MED29Q9NX70 200 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 LPAR3Q9UBY5 353 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 FBXL3Q9UKT7 428 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 TRAPPC13A5PLN9 417 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 LRRN3E7EW58 273 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 ENTPD5O75356 428 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 LYPD3O95274 346 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 NPPAP01160 153 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 OPN1SWP03999 348 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 CELA3BP08861 270 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 FAM157CP0CG43 387 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 IGHV4-31P0DP07 118 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 CD247P20963 164 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 GZMMP51124 257 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF74Q16587 644 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 GSG1Q2KHT4 349 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 VMACQ2NL98 169 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
MRPS28-204ENST00000519120 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 TTC33Q6PID6 262 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-204ENST00000519120 VHLLQ6RSH7 139 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 OR6N1Q8NGY5 312 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 NEU4Q8WWR8 484 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-204ENST00000519120 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
MRPS28-204ENST00000519120 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF75AQ96N20 296 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 DOK1Q99704 481 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 FOXB1Q99853 325 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 VRK1Q99986 396 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-204ENST00000519120 NOX3Q9HBY0 568 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 POFUT2Q9Y2G5 429 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 DNHD1Q96M86 4753 aa13.66□□□□□ -0.22
MRPS28-204ENST00000519120 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ATRQ13535 2644 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 FBN1P35555 2871 aaKnown RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 A0A0G2JND7 137 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 OR6A2O95222 327 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 THY1P04216 161 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ERCC1P07992 297 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF14P17017 642 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 AHCYP23526 432 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 THBS4P35443 961 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 EVX1P49640 407 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 NPRL3Q12980 569 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 CARD17Q5XLA6 110 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 WDR88Q6ZMY6 472 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF813Q6ZN06 617 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 PIWIL3Q7Z3Z3 882 aaKnown RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 OR8J3Q8NGG0 315 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 OR10A6Q8NH74 314 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 SLC26A7Q8TE54 656 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 POLR2J2Q9GZM3 115 aaKnown RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 POLR2J3Q9H1A7 115 aaKnown RBP13.65□□□□□ -0.22
MRPS28-204ENST00000519120 NANSQ9NR45 359 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF229Q9UJW7 825 aa13.65□□□□□ -0.22
MRPS28-204ENST00000519120 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 TMEM129A0AVI4 362 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 CPSF4LA6NMK7 179 aaKnown RBP13.64□□□□□ -0.23
MRPS28-204ENST00000519120 SEC14L2O76054 403 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 UBL3O95164 117 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 IGF2P01344 180 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 HLA-HP01893 362 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 IFNGR1P15260 489 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 NR4A1P22736 598 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 GIFP27352 417 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 CAPZA2P47755 286 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 SNTB2Q13425 540 aaKnown RBP13.64□□□□□ -0.23
MRPS28-204ENST00000519120 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 DAG1Q14118 895 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 NANOGP8Q6NSW7 305 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 SLC35D2Q76EJ3 337 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 CALHM3Q86XJ0 350 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 ANKS4BQ8N8V4 417 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 FOXN4Q96NZ1 517 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 NANOGQ9H9S0 305 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 TAS2R5Q9NYW4 299 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 SLC7A7Q9UM01 511 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 CMAHPQ9Y471 501 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 SPEF1Q9Y4P9 236 aa13.64□□□□□ -0.23
MRPS28-204ENST00000519120 BBIP1A8MTZ0 92 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 FBP2O00757 339 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 CH25HO95992 272 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 ASAH2BP0C7U1 165 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 CD79AP11912 226 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF35P13682 527 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 B4GALT1P15291 398 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 THBS2P35442 1172 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 CRYBA2P53672 197 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 BIDP55957 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms