RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CT62P0C5K7 136 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HNRNPCL4P0DMR1 293 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CPMP14384 443 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 POU2F1P14859 743 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 RPS4Y1P22090 263 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 AZGP1P25311 298 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CD27P26842 260 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PSMB9P28065 219 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CAPZBP47756 277 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GABRA4P48169 554 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 IDH2P48735 452 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 XKP51811 444 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CRISP1P54107 249 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 UGT2B15P54855 530 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TMBIM6P55061 237 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 RAB38P57729 211 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 VSX2P58304 361 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HNRNPKP61978 463 aaKnown RBP eCLIP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HPCAP84074 193 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 NHLH1Q02575 133 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 COL10A1Q03692 680 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 DGCR6Q14129 220 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HNF4GQ14541 408 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 DUSP5Q16690 384 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PRTGQ2VWP7 1150 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 LRIT3Q3SXY7 679 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GPAT3Q53EU6 434 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SYT6Q5T7P8 510 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 UBE2UQ5VVX9 321 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MLIPQ5VWP3 458 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TMEM236Q5W0B7 351 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 C12orf73Q69YU5 71 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PODNL1Q6PEZ8 512 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 BHLHB9Q6PI77 547 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF836Q6ZNA1 936 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 DGAT2L6Q6ZPD8 337 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ABHD13Q7L211 337 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PRSS48Q7RTY5 328 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 OOSP2Q86WS3 158 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MEX3DQ86XN8 651 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 DEFB119Q8N690 84 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GCSAMQ8N6F7 178 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 IQCF1Q8N6M8 205 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF540Q8NDQ6 660 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC7A13Q8TCU3 470 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 RAB2BQ8WUD1 216 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 RASSF5Q8WWW0 418 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 OIT3Q8WWZ8 545 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GGHQ92820 318 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CDS1Q92903 461 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SLAMF9Q96A28 289 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ANKRD9Q96BM1 317 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TXNDC15Q96J42 360 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GPA33Q99795 319 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 FNDC11Q9BVV2 318 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PINK1Q9BXM7 581 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 UCK2Q9BZX2 261 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CCDC90BQ9GZT6 254 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF350Q9GZX5 532 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 WNT5BQ9H1J7 359 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GPN2Q9H9Y4 310 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 LMAN1LQ9HAT1 526 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CCNB1IP1Q9NPC3 277 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ACOT13Q9NPJ3 140 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CTPS2Q9NRF8 586 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 STARD5Q9NSY2 213 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PLCXD1Q9NUJ7 323 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HRASLS2Q9NWW9 162 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SCN3BQ9NY72 215 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TAS2R16Q9NYV7 291 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MAT2BQ9NZL9 334 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 PTGFRNQ9P2B2 879 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MGAT4BQ9UQ53 548 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF443Q9Y2A4 671 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 NTNG1Q9Y2I2 539 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TPRKBQ9Y3C4 175 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 FAM32AQ9Y421 112 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 LOXL2Q9Y4K0 774 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF780BQ9Y6R6 833 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TRIOO75962 3097 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 KNL1Q8NG31 2342 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 NPIPA5A0A0B4J1W7 369 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 CLDN24A6NM45 220 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 NPIPA7E9PJI5 369 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 TLR4O00206 839 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 CLDN4O14493 209 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 SOCS6O14544 535 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 KIAA0513O60268 411 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 OR10H3O60404 316 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 LDB3O75112 727 aa4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 BCAS1O75363 584 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-212ENST00000518919 SOX30O94993 753 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms