RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 GABARAPL3Q9BY60 117 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 LRRN3Q9H3W5 708 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 IL26Q9NPH9 171 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 OR12D3Q9UGF7 316 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 OR10H1Q9Y4A9 318 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 FBN3Q75N90 2809 aa1.07□□□□□ -2.24
PCM1-208ENST00000518877 NLRC5Q86WI3 1866 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 ZNF407Q9C0G0 2248 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 A0A1W2PP18 115 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 MAPK13O15264 365 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 CLDN3O15551 220 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 RBFOX2O43251 390 aaKnown RBP eCLIP1.06□□□□□ -2.24
PCM1-208ENST00000518877 PRKAB2O43741 272 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 CCNKO75909 580 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 ZDHHC11BP0C7U3 371 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 EPB41P11171 864 aaKnown RBP1.06□□□□□ -2.24
PCM1-208ENST00000518877 CMA1P23946 247 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 MDH1P40925 334 aaKnown RBP1.06□□□□□ -2.24
PCM1-208ENST00000518877 NPBWR2P48146 333 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 TNFRSF17Q02223 184 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 ASPHQ12797 758 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 AQP6Q13520 282 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 ZBED5Q49AG3 693 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 TTC23Q5W5X9 447 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 FBXW9Q5XUX1 488 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 DNAJC24Q6P3W2 148 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 CEMP1Q6PRD7 247 aaPredicted RBP1.06□□□□□ -2.24
PCM1-208ENST00000518877 CCDC65Q8IXS2 484 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 UBALD2Q8IYN6 164 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 LGI3Q8N145 548 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 FAM133AQ8N9E0 248 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 SGK3Q96BR1 496 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 MTMR9Q96QG7 549 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 GPA33Q99795 319 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 OMDQ99983 421 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 CD84Q9UIB8 345 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 PSG8Q9UQ74 426 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 MRPS33Q9Y291 106 aaKnown RBP1.06□□□□□ -2.24
PCM1-208ENST00000518877 KCNIP3Q9Y2W7 256 aa1.06□□□□□ -2.24
PCM1-208ENST00000518877 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.06□□□□□ -2.24
PCM1-208ENST00000518877 METTL21EPA6NDL7 271 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 SGK1O00141 431 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 XPO1O14980 1071 aaKnown RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 IQCF3P0C7M6 154 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 FOLR1P15328 257 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 HPGDP15428 266 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 PSMC3P17980 439 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 COL8A2P25067 703 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 RFX3P48380 749 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 RAP1AP62834 184 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 RPS21P63220 83 aaKnown RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 LOXL1Q08397 574 aaPredicted RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 OR5I1Q13606 314 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 GANABQ14697 944 aaKnown RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 PON3Q15166 354 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 PHYHD1Q5SRE7 291 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 HES5Q5TA89 166 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 RAET1LQ5VY80 246 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 UQCC3Q6UW78 93 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 ECHDC2Q86YB7 292 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 ZDHHC21Q8IVQ6 265 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 ANKFN1Q8N957 763 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 EXOSC8Q96B26 276 aaKnown RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 EFHD2Q96C19 240 aaPredicted RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 MS4A4EQ96PG1 132 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 FAIM2Q9BWQ8 316 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 RWDD1Q9H446 243 aaPredicted RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 RANBP3Q9H6Z4 567 aaPredicted RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 YY1AP1Q9H869 796 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 TM9SF3Q9HD45 589 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 ADAP2Q9NPF8 381 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 GLRX2Q9NS18 164 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 UFSP2Q9NUQ7 469 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 TAS2R3Q9NYW6 316 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 PIPOXQ9P0Z9 390 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 HOOK1Q9UJC3 728 aaKnown RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 ODF2LQ9ULJ1 636 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 PACSIN2Q9UNF0 486 aaPredicted RBP1.05□□□□□ -2.24
PCM1-208ENST00000518877 MMACHCQ9Y4U1 282 aa1.05□□□□□ -2.24
PCM1-208ENST00000518877 SEC16AO15027 2179 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 IGHV5-10-1A0A0J9YXX1 117 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 ZNF726A6NNF4 738 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 A8MUI8 341 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 A8MXQ7 604 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 H3BNH8 94 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 KMOO15229 486 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 RRP8O43159 456 aaKnown RBP1.04□□□□□ -2.24
PCM1-208ENST00000518877 NCK1P16333 377 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 TCN2P20062 427 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 ATP6V1C1P21283 382 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 CD86P42081 329 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 PPT1P50897 306 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 HTD2P86397 168 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 CDK16Q00536 496 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 CDC20Q12834 499 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 POU2AF1Q16633 256 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 COA6Q5JTJ3 125 aaKnown RBP1.04□□□□□ -2.24
PCM1-208ENST00000518877 KDM7AQ6ZMT4 941 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 STRADAQ7RTN6 431 aa1.04□□□□□ -2.24
PCM1-208ENST00000518877 BIVMQ86UB2 503 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms