RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 SLC25A35Q3KQZ1 300 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 C1QTNF12Q5T7M4 302 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 TTC23Q5W5X9 447 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 LPCAT4Q643R3 524 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 XKRXQ6PP77 449 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 FAM122BQ7Z309 247 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 MEX3DQ86XN8 651 aaKnown RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 ZNF100Q8IYN0 542 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 TRUB1Q8WWH5 349 aaKnown RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 ASB10Q8WXI3 467 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 ZNF566Q969W8 418 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 APH1AQ96BI3 265 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 ERMAPQ96PL5 475 aaPredicted RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 RBP7Q96R05 134 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 EGLN3Q9H6Z9 239 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 B3GAT2Q9NPZ5 323 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 KLHL21Q9UJP4 597 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 ZNF346Q9UL40 294 aaKnown RBP8.41□□□□□ -1.06
CLN8-203ENST00000518780 IER3IP1Q9Y5U9 82 aa8.41□□□□□ -1.06
CLN8-203ENST00000518780 SVILO95425 2214 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 MED12Q93074 2177 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 A0A0G2JNJ9 132 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ZAR1LA6NP61 321 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 H0YAE9 185 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SLC16A6O15403 523 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SOX14O95416 240 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 CGAP01215 116 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 HLA-DOBP13765 273 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ACADSP16219 412 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 POU1F1P28069 291 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ACVR1BP36896 505 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 VHLP40337 213 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 CENPAP49450 140 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 BIDP55957 195 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ERVK-25P63136 954 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 P2RY6Q15077 328 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SNCBQ16143 134 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 HIST3H3Q16695 136 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 PGGHGQ32M88 737 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 THEM4Q5T1C6 240 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SLX4IPQ5VYV7 408 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 FBXW9Q5XUX1 488 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 NIPAL3Q6P499 406 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 CASP12Q6UXS9 341 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 C3P1Q6ZMU1 363 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 BEND4Q6ZU67 534 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 MRGPRGQ86SM5 289 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 C20orf196Q8IYI0 205 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 GCNT2Q8N0V5 402 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 TMEM123Q8N131 208 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 RPRMLQ8N4K4 120 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 MARVELD2Q8N4S9 558 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ZNF555Q8NEP9 628 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 LILRB4Q8NHJ6 448 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ZNF519Q8TB69 540 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 STARD4Q96DR4 205 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 LRRC46Q96FV0 321 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 TXNDC15Q96J42 360 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 HRASLS5Q96KN8 279 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ZNF570Q96NI8 536 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ZNF385AQ96PM9 386 aaKnown RBP8.4□□□□□ -1.06
CLN8-203ENST00000518780 OR2M2Q96R28 347 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 PLA2G12AQ9BZM1 189 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ENKD1Q9H0I2 346 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SLCO5A1Q9H2Y9 848 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 FN3KQ9H479 309 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 TOR3AQ9H497 397 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 CMC2Q9NRP2 79 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 VSX1Q9NZR4 365 aaPredicted RBP8.4□□□□□ -1.06
CLN8-203ENST00000518780 MALT1Q9UDY8 824 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 Q9UFV3 132 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SH3BGRL2Q9UJC5 107 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
CLN8-203ENST00000518780 PROCRQ9UNN8 238 aa8.4□□□□□ -1.06
CLN8-203ENST00000518780 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 NBASA2RRP1 2371 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 PRSS37A4D1T9 235 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 RIIAD1A6NNX1 92 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 KDM4EB2RXH2 506 aaPredicted RBP8.39□□□□□ -1.07
CLN8-203ENST00000518780 E9PQ18 207 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 MPZL2O60487 215 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 MITFO75030 526 aaPredicted RBP8.39□□□□□ -1.07
CLN8-203ENST00000518780 SERPINI2O75830 405 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 KRT33AO76009 404 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 PPP1R3DO95685 299 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 RENP00797 406 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 ZNF3P17036 446 aa8.39□□□□□ -1.07
CLN8-203ENST00000518780 PAICSP22234 425 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms