RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PPOXP50336 477 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 MECP2P51608 486 aaKnown RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 NCBP2P52298 156 aaKnown RBP eCLIP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 CHN2P52757 468 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SLC16A1P53985 500 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 CDH13P55290 713 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ACTG1P63261 375 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ZNF117Q03924 483 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SCRN3Q0VDG4 424 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 NRN1LQ496H8 165 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 IQCCQ4KMZ1 466 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 IGSF11Q5DX21 431 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 PET117Q6UWS5 81 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 GAS2L3Q86XJ1 694 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 CADM3Q8N126 398 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ZNF786Q8N393 782 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 CEP112Q8N8E3 955 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 CDYL2Q8N8U2 506 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ZDHHC22Q8N966 263 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 GATSQ8NAP1 163 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 HIPK4Q8NE63 616 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ZFP90Q8TF47 636 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 FBXO17Q96EF6 278 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 PHF21BQ96EK2 531 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SH3YL1Q96HL8 342 aaPredicted RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 REXO5Q96IC2 774 aaKnown RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 RBM4Q9BWF3 364 aaKnown RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 METTL17Q9H7H0 456 aaPredicted RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ANKZF1Q9H8Y5 726 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 FKRPQ9H9S5 495 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 C3orf14Q9HBI5 128 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ESM1Q9NQ30 184 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 PFDN4Q9NQP4 134 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SLC17A5Q9NRA2 495 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.19□□□□□ -1.58
PABPC1-207ENST00000518716 GIMAP4Q9NUV9 329 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 TAS2R16Q9NYV7 291 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SENP1Q9P0U3 644 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 TXNDC16Q9P2K2 825 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 RNF14Q9UBS8 474 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 POU2F3Q9UKI9 436 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SNX6Q9UNH7 406 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 GAB2Q9UQC2 676 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 PPP2R2CQ9Y2T4 447 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 SNX24Q9Y343 169 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 FKBP7Q9Y680 259 aa5.19□□□□□ -1.58
PABPC1-207ENST00000518716 A0A096LPK6 155 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 A0A0U1RQK1 487 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 LOC100506127A0A0U1RQW1 187 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 TMEM129A0AVI4 362 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ZNF320A2RRD8 509 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 B4DSR2 109 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 B9A039 149 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PRR23D1E9PI22 279 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 E9PI62 339 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 M0R1B8 84 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 GTPBP1O00178 669 aaKnown RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 GATCO43716 136 aaKnown RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PDE5AO76074 875 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ESRRBO95718 433 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 IFNA14P01570 189 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 IGHV3-9P01782 118 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PRR23D2P0DMB1 279 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 TSPAN8P19075 237 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PTBP1P26599 531 aaKnown RBP eCLIP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 APEX1P27695 318 aaKnown RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 SERPINF1P36955 418 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 HSD17B3P37058 310 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 FRKP42685 505 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 RFX3P48380 749 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PCP4P48539 62 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 HTR6P50406 440 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 IDH3GP51553 393 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 RAD23AP54725 363 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 SUMO3P55854 103 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 MRPS25P82663 173 aaKnown RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 H3F3AP84243 136 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 DGCR2P98153 550 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 SELENBP1Q13228 472 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 NAB1Q13506 487 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 TRIP10Q15642 601 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 DUSP5Q16690 384 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 SPIN4Q56A73 249 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 HIST2H2BDQ6DRA6 164 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 UGT2A3Q6UWM9 527 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 TMPPEQ6ZT21 453 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 FKBP9P1Q75LS8 142 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ZNF551Q7Z340 670 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 PIWIL3Q7Z3Z3 882 aaKnown RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 CTAGE3PQ8IX95 158 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 C17orf78Q8N4C9 275 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 CDRT4Q8N9R6 151 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 C1orf162Q8NEQ5 155 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 OR6Y1Q8NGX8 325 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ZNF764Q96H86 408 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 ANKRD27Q96NW4 1050 aa5.18□□□□□ -1.58
PABPC1-207ENST00000518716 RAB3IPQ96QF0 476 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-207ENST00000518716 DOK1Q99704 481 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms