RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CHRNB3Q05901 458 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SCRN3Q0VDG4 424 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TFDP1Q14186 410 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SELPLGQ14242 412 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ALX1Q15699 326 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 PRR4Q16378 134 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MOGQ16653 247 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SBK1Q52WX2 424 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CLVS2Q5SYC1 327 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 C9orf129Q5T035 196 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 GPR157Q5UAW9 335 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SLX4IPQ5VYV7 408 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF57Q68EA5 555 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SCYL2Q6P3W7 929 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 NIPAL3Q6P499 406 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM107Q6UX40 140 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 UTS2BQ765I0 119 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CYP4Z1Q86W10 505 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 IFNEQ86WN2 208 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 NELFCDQ8IXH7 590 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 PRR22Q8IZ63 422 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MCOLN2Q8IZK6 566 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ARHGAP18Q8N392 663 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 BPIFB2Q8N4F0 458 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CSNK1A1LQ8N752 337 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 PQLC3Q8N755 202 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SNX31Q8N9S9 440 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 SYT14Q8NB59 555 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 OR8J2Q8NGG1 315 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ADAMTS16Q8TE57 1224 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ELMO1Q92556 727 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ESR2Q92731 530 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MRGPRFQ96AM1 343 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 C18orf25Q96B23 403 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 OTUB2Q96DC9 234 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM80Q96HE8 168 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 C4orf36Q96KX1 117 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 VSTM2LQ96N03 204 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 NAPGQ99747 312 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 OMDQ99983 421 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MED10Q9BTT4 135 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 C20orf24Q9BUV8 137 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ANGPTL4Q9BY76 406 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 DHX33Q9H6R0 707 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 PARVBQ9HBI1 364 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ZFP14Q9HCL3 533 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MRPS30Q9NP92 439 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MRPL40Q9NQ50 206 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF302Q9NR11 478 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 DYRK4Q9NR20 520 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MRPL39Q9NYK5 338 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 USE1Q9NZ43 259 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MTCH1Q9NZJ7 389 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CD274Q9NZQ7 290 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM9Q9P0T7 183 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TBC1D24Q9ULP9 559 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 FOXJ3Q9UPW0 622 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 PDE10AQ9Y233 779 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF256Q9Y2P7 627 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 L3MBTL1Q9Y468 752 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CPS1P31327 1500 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 LRRC7Q96NW7 1537 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 UGGT2Q9NYU1 1516 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 POLR3AO14802 1390 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 SYNMO15061 1565 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 KDM5CP41229 1560 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NEURL4Q96JN8 1562 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 DIP2CQ9Y2E4 1556 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 C9orf84Q5VXU9 1444 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 SMCO2A6NFE2 343 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 SERPINE3A8MV23 424 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 E7EWF7 191 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NPIPA7E9PJI5 369 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4DF5H284 164 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 WWP2O00308 870 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CLDN5O00501 218 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CDX4O14627 284 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 LIN7AO14910 233 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 GATCO43716 136 aaKnown RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 DUX1O43812 170 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 LANCL1O43813 399 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 H6PDO95479 791 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PGK1P00558 417 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CA3P07451 260 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ERCC1P07992 297 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 DUX4L4P0CJ87 422 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NPIPA8P0DM63 369 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CALM1P0DP23 149 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CALM2P0DP24 149 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CALM3P0DP25 149 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NQO2P16083 231 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 HNF1AP20823 631 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 GSTM3P21266 225 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 IL12BP29460 328 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CD80P33681 288 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CDKN2CP42773 168 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CASP4P49662 377 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ACADVLP49748 655 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms