RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 TXNIPQ9H3M7 391 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 C12orf49Q9H741 205 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 PAPOLBQ9NRJ5 636 aaKnown RBP11.52□□□□□ -0.57
PABPC1-205ENST00000518196 PLSCR4Q9NRQ2 329 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 POFUT2Q9Y2G5 429 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 PCNX1Q96RV3 2341 aa11.52□□□□□ -0.57
PABPC1-205ENST00000518196 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 NPIPB13A6NJU9 1138 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 OR6C65A6NJZ3 312 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 NPIPB4C9JG80 1138 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 PDLIM1O00151 329 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-205ENST00000518196 TNFSF13O75888 250 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 SMNDC1O75940 238 aaKnown RBP eCLIP11.51□□□□□ -0.578e-8■■■■■ 27.3
PABPC1-205ENST00000518196 AGFG2O95081 481 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 CD14P08571 375 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 IFNGR1P15260 489 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 AGAP20933 346 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 BMP5P22003 454 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 DAPP51397 102 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 RPS6KA3P51812 740 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 SLC25A35Q3KQZ1 300 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 NIPAL3Q6P499 406 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 KLHL17Q6TDP4 642 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ZNF620Q6ZNG0 422 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ZBTB49Q6ZSB9 765 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 IGFN1Q86VF2 1251 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-205ENST00000518196 LRRC75AQ8NAA5 344 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 CA5BP1Q8WTZ4 195 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 SAMD8Q96LT4 415 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 GPX7Q96SL4 187 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-205ENST00000518196 IFT27Q9BW83 186 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
PABPC1-205ENST00000518196 EGLN3Q9H6Z9 239 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 SMURF2Q9HAU4 748 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 MED29Q9NX70 200 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 IL20Q9NYY1 176 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ENOPH1Q9UHY7 261 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
PABPC1-205ENST00000518196 RCE1Q9Y256 329 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 ORC6Q9Y5N6 252 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
PABPC1-205ENST00000518196 H3BN98 237 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 MSTNO14793 375 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 MGRN1O60291 552 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 ZG16O60844 167 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 SLC43A1O75387 559 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 SOX14O95416 240 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 IGHMP01871 453 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 CD8BP10966 210 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 BMP4P12644 408 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 OSMP13725 252 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 ZNF26P17031 533 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-205ENST00000518196 IGFBP5P24593 272 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 OR3A2P47893 321 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 BIDP55957 195 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
PABPC1-205ENST00000518196 ERVK-25P63136 954 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-205ENST00000518196 RIPK1Q13546 671 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 DAG1Q14118 895 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 MELKQ14680 651 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TRIP10Q15642 601 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 ACKR1Q16570 336 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 FAM205BPQ63HN1 556 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 KDM4DQ6B0I6 523 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 KIF18BQ86Y91 864 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 OR6X1Q8NH79 312 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 LILRB4Q8NHJ6 448 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TEX47Q8TBZ9 253 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 LRRC46Q96FV0 321 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TXNDC15Q96J42 360 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 EMC6Q9BV81 110 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 KATNB1Q9BVA0 655 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TSSK6Q9BXA6 273 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 RNPEPL1Q9HAU8 725 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 NRIP3Q9NQ35 241 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 TBC1D23Q9NUY8 699 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 GRHPRQ9UBQ7 328 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 UPB1Q9UBR1 384 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 BAIAP2Q9UQB8 552 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 IER3IP1Q9Y5U9 82 aa11.5□□□□□ -0.57
PABPC1-205ENST00000518196 A6NIZ1 184 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 EEF1E1-BLOC1S5C9J1V9 151 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 XKRYO14609 159 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 EI24O14681 340 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 IMPA2O14732 288 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 EEF1E1O43324 174 aaKnown RBP11.49□□□□□ -0.57
PABPC1-205ENST00000518196 IDH3BO43837 385 aa11.49□□□□□ -0.57
PABPC1-205ENST00000518196 KRT33AO76009 404 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms