RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GOSR2O14653 212 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 PSMB1P20618 241 aaKnown RBP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 M6PRP20645 277 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 THBS2P35442 1172 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 FXYD4P59646 89 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 UBE2NP61088 152 aaKnown RBP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 NR0B2Q15466 257 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC6A19Q695T7 634 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 FCRLAQ7L513 359 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 ELF4Q99607 663 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 DUSP23Q9BVJ7 150 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 FANCFQ9NPI8 374 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 MAN2C1Q9NTJ4 1040 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 HHLA2Q9UM44 414 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 A0A0B4J203 849 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 A0A1B0GV50 99 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 PPM1DO15297 605 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 FCMRO60667 390 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 SPDEFO95238 335 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 OPRD1P41143 372 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 C9orf50Q5SZB4 431 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 ARTNQ5T4W7 220 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZNF770Q6IQ21 691 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 TECPR1Q7Z6L1 1165 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC38A6Q8IZM9 456 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR51T1Q8NGJ9 327 aa9.97□□□□□ -0.81
PCDHGA1-202ENST00000517417 A6NIZ1 184 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 HCRTR1O43613 425 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 RAP1BP61224 184 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 RAP1AP62834 184 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 TSC22D1Q15714 1073 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 RNLSQ5VYX0 342 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 KANSL1Q7Z3B3 1105 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SYT9Q86SS6 491 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 KDM8Q8N371 416 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SIRT6Q8N6T7 355 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR4Q3Q8NH05 313 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 CCNL2Q96S94 520 aaPredicted RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SEC22CQ9BRL7 303 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 ALG12Q9BV10 488 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 GSX2Q9BZM3 304 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 ULBP3Q9BZM4 244 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 ANKRD19PQ9H560 264 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC39A1Q9NY26 324 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 IGHV3-20A0A0C4DH32 117 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SIGLEC6O43699 453 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 WDPCPO95876 746 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC35E2P0CK97 266 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 PRKACAP17612 351 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 LIMS1P48059 325 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 CSNK1A1P48729 337 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 EPHA5P54756 1037 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 GK2Q14410 553 aaPredicted RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 UBE2NLQ5JXB2 153 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 PAPD4Q6PIY7 484 aaKnown RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMEM150AQ86TG1 271 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR5H2Q8NGV7 314 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZC3HAV1LQ96H79 300 aaKnown RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 CYSLTR2Q9NS75 346 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 CAMK2AQ9UQM7 478 aa9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 UBE2J1Q9Y385 318 aaPredicted RBP9.96□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZDBF2Q9HCK1 2354 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 FAM230AA0A1W2PPH8 454 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 PRKAR1BP31321 381 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR1D5P58170 312 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 PPP2CBP62714 309 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 PPP2CAP67775 309 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 FOXK2Q01167 660 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 DBPQ10586 325 aaPredicted RBP9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 KCNAB1Q14722 419 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD163Q86VB7 1156 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 RNF113BQ8IZP6 322 aaKnown RBP9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 ANKRD53Q8N9V6 530 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 AGBL5Q8NDL9 886 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR13C5Q8NGS8 318 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 SMAP2Q8WU79 429 aaPredicted RBP9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 FGF14Q92915 247 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 SEMA6CQ9H3T2 930 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 BCL2L10Q9HD36 194 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 GLS2Q9UI32 602 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 DAPP1Q9UN19 280 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 WASF3Q9UPY6 502 aa9.96□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC33A1O00400 549 aaPredicted RBP9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 SERPINA5P05154 406 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 GDF1P27539 372 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 CXADRP78310 365 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 DPTQ07507 201 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 GNMTQ14749 295 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 MLF2Q15773 248 aaPredicted RBP9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 C9orf62Q8N4C0 152 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR8D4Q8NGM9 314 aa9.95□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZFPM2Q8WW38 1151 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms