RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 HLA-DOBP13765 273 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 IFNGR1P15260 489 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 HSPA13P48723 471 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 RAP1BP61224 184 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 RAP1AP62834 184 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 MRPL49Q13405 166 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 STK11Q15831 433 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 HSPB2Q16082 182 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 HIST3H3Q16695 136 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 PGGHGQ32M88 737 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 C4orf17Q53FE4 359 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 TMEM201Q5SNT2 666 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 C12orf73Q69YU5 71 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 TMEM123Q8N131 208 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 KDM8Q8N371 416 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 GALNT4Q8N4A0 578 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 ARIH2OSQ8N7S6 290 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 OR6K3Q8NGY3 331 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 OR4Q3Q8NH05 313 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 FNDC8Q8TC99 324 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 INTS12Q96CB8 462 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC25A44Q96H78 314 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 TSPAN32Q96QS1 320 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 IFT27Q9BW83 186 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 SFXN3Q9BWM7 321 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 TEX12Q9BXU0 123 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 POLDIP3Q9BY77 421 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 MRPL13Q9BYD1 178 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 GRHPRQ9UBQ7 328 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF629Q9UEG4 869 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF346Q9UL40 294 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 NDRG4Q9ULP0 352 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 EMC9Q9Y3B6 208 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 ALPK2Q86TB3 2170 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 NOTCH2Q04721 2471 aa10.63□□□□□ -0.71
PDLIM5-220ENST00000514830 FLNCQ14315 2725 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 TRGV8A0A0C4DH27 118 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 TNFSF13O75888 250 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 PPP1R3DO95685 299 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 PLGP00747 810 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 IGFBP1P08833 259 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 TMIGD3P0DMS9 266 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 CD8BP10966 210 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 NR2C1P13056 603 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 CTSSP25774 331 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 EPHA2P29317 976 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 NTF4P34130 210 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 KIR2DL2P43627 348 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 OR3A2P47893 321 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF133P52736 654 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 CLDN17P56750 224 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ERVK-25P63136 954 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ADARB1P78563 741 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 EFNB1P98172 346 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 MYBPC1Q00872 1141 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 IL18R1Q13478 541 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 KEAP1Q14145 624 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 GINS1Q14691 196 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ACSM5Q6NUN0 579 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 MYO7BQ6PIF6 2116 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 PLXDC2Q6UX71 529 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 FAM26EQ8N5C1 309 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF570Q96NI8 536 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ERMAPQ96PL5 475 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF385AQ96PM9 386 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 OR2M2Q96R28 347 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 DDOQ99489 341 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ALG12Q9BV10 488 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 PRRG3Q9BZD7 231 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 LINC00470Q9BZP3 86 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 CMC2Q9NRP2 79 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 FAM118AQ9NWS6 357 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 KLHL21Q9UJP4 597 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 FOXD3Q9UJU5 478 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 NOSIPQ9Y314 301 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 ADAM18Q9Y3Q7 739 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 IER3IP1Q9Y5U9 82 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 CREBBPQ92793 2442 aa10.62□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 SURF4O15260 269 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 CGAP01215 116 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 IGHG1P01857 330 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PGA4P0DJD7 388 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PGA3P0DJD8 388 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 ACADSP16219 412 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 GNLYP22749 145 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 OPRM1P35372 400 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 GGT2P36268 569 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 POLR2IP36954 125 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PCYT1AP49585 367 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 BIDP55957 195 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms