RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GPR35Q9HC97 309 aa12.26□□□□□ -0.45
USP46-209ENST00000514536 POMPQ9Y244 141 aa12.26□□□□□ -0.45
USP46-209ENST00000514536 TMEM5Q9Y2B1 443 aa12.26□□□□□ -0.45
USP46-209ENST00000514536 HIF3AQ9Y2N7 669 aa12.26□□□□□ -0.45
USP46-209ENST00000514536 SH3PXD2BA1X283 911 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 AQP12BA6NM10 295 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 RPL36A-HNRNPH2H7BZ11 118 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 CLOCKO15516 846 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 MAGEA2P43356 314 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 OMPP47874 163 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 FHL1Q13642 323 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 ALG10Q5BKT4 473 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 BEX5Q5H9J7 111 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 AQP12AQ8IXF9 295 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 WDR31Q8NA23 367 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 C1orf162Q8NEQ5 155 aaPredicted RBP12.25□□□□□ -0.45
USP46-209ENST00000514536 OR1K1Q8NGR3 316 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 ZNF837Q96EG3 531 aaPredicted RBP12.25□□□□□ -0.45
USP46-209ENST00000514536 B3GAT2Q9NPZ5 323 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 SLC7A8Q9UHI5 535 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 AURKCQ9UQB9 309 aa12.25□□□□□ -0.45
USP46-209ENST00000514536 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 ALPK2Q86TB3 2170 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 ABCA12Q86UK0 2595 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 A0A1W2PPR1 153 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 MCIDASD6RGH6 385 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 KRT36O76013 467 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 LOXP28300 417 aaPredicted RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 SLC9A3P48764 834 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 CTXN1P60606 82 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 RPS4XP62701 263 aaKnown RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 ARF1P84077 181 aaKnown RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 RUNX1T1Q06455 604 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 FLOT2Q14254 428 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 ACKR1Q16570 336 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 ZBED5Q49AG3 693 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 HIKESHIQ53FT3 197 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 IGFN1Q86VF2 1251 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 SPATA24Q86W54 205 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 ADGRG5Q8IZF4 528 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 CANT1Q8WVQ1 401 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 NRGNQ92686 78 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 BCL2L2Q92843 193 aaPredicted RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 ZNF566Q969W8 418 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 PLPPR2Q96GM1 343 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 CHID1Q9BWS9 393 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 C1QTNF6Q9BXI9 259 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 NGBQ9NPG2 151 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 KRCC1Q9NPI7 259 aaPredicted RBP12.24□□□□□ -0.45
USP46-209ENST00000514536 SLC17A5Q9NRA2 495 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
USP46-209ENST00000514536 A0A096LPE4 126 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 TNFRSF11BO00300 401 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 OR10H3O60404 316 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 RAP2AP10114 183 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 LIMS1P48059 325 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 CSNK1A1P48729 337 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ERFP50548 548 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 HMGA2P52926 109 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ANKDD1AQ495B1 522 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 SEZ6L2Q6UXD5 910 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ASB10Q8WXI3 467 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 TMEM54Q969K7 222 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 GPA33Q99795 319 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ULBP2Q9BZM5 246 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 TXNIPQ9H3M7 391 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 LIME1Q9H400 295 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 GLTPQ9NZD2 209 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 ZNF346Q9UL40 294 aaKnown RBP12.23□□□□□ -0.45
USP46-209ENST00000514536 LYVE1Q9Y5Y7 322 aa12.23□□□□□ -0.45
USP46-209ENST00000514536 PRR14LQ5THK1 2151 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 DHRS12A0PJE2 317 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 DPRXA6NFQ7 191 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 UNC119BA6NIH7 251 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 PTP4A3O75365 173 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 ACADSP16219 412 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 ZNF26P17031 533 aaPredicted RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 DAP3P51398 398 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 PRPS1P60891 318 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 PPP1R8Q12972 351 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 TOP3AQ13472 1001 aaPredicted RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 TBRG1Q3YBR2 411 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 ARMC4Q5T2S8 1044 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 OR2T5Q6IEZ7 315 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 C17orf78Q8N4C9 275 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 OR2T29Q8NH02 315 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 BOD1Q96IK1 185 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 LRMDAQ9H2I8 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms