RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 YES1P07947 543 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 HOXD4P09016 255 aaPredicted RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 EFNB1P98172 346 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 IL5RAQ01344 420 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RUNX1T1Q06455 604 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 KRR1Q13601 381 aaKnown RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 MESTQ5EB52 335 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 C1orf185Q5T7R7 199 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 C8orf59Q8N0T1 100 aaPredicted RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 TCEANCQ8N8B7 351 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 SETD9Q8NE22 299 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ASB10Q8WXI3 467 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 CNBD2Q96M20 576 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RASSF1Q9NS23 344 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ZNF226Q9NYT6 803 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RNF6Q9Y252 685 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 GPR52Q9Y2T5 361 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 A6NIZ1 184 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 DENRO43583 198 aaKnown RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 ZNF3P17036 446 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 MYF6P23409 242 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 NTF4P34130 210 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RAP1BP61224 184 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ISL1P61371 349 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RAP1AP62834 184 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.13□□□□□ -0.47
RACK1-230ENST00000513060 CAMK2DQ13557 499 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 JAZF1Q86VZ6 243 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RPRMLQ8N4K4 120 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 CYB561A3Q8NBI2 242 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 NPEPL1Q8NDH3 523 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 SDR9C7Q8NEX9 313 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 OR8J1Q8NGP2 316 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 OR6X1Q8NH79 312 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RHOXF1Q8NHV9 184 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 TRUB1Q8WWH5 349 aaKnown RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 SLC25A44Q96H78 314 aaPredicted RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 TM9SF2Q99805 663 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 EMC3Q9P0I2 261 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 SH3BGRL2Q9UJC5 107 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 KLHL21Q9UJP4 597 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 H7C1C5 153 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 TRMUO75648 421 aaKnown RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 ACADSP16219 412 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 LCN6P62502 163 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 ITGADQ13349 1161 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 CRMP1Q14194 572 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 NIPAL3Q6P499 406 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 LEG1Q6P5S2 330 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 AAED1Q7RTV5 226 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 HDDC2Q7Z4H3 204 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 THAP5Q7Z6K1 395 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 ADCK1Q86TW2 530 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 CPOQ8IVL8 374 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 GCNT2Q8N0V5 402 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 SYT14Q8NB59 555 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 SLC37A3Q8NCC5 494 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 HDAC2Q92769 488 aaKnown RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 OTULINQ96BN8 352 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 GP6Q9HCN6 339 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 NOSIPQ9Y314 301 aaKnown RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 HSPE1-MOB4S4R3N1 261 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
RACK1-230ENST00000513060 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
RACK1-230ENST00000513060 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 OR6C68A6NDL8 312 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
RACK1-230ENST00000513060 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
RACK1-230ENST00000513060 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
RACK1-230ENST00000513060 FAM183AA6NL82 134 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 MPZL2O60487 215 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
RACK1-230ENST00000513060 ZNF432O94892 652 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 IGHG1P01857 330 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 PRB1P04280 392 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 GABRB1P18505 474 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 SELENOPP49908 381 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 PER3P56645 1201 aa12.11□□□□□ -0.47
RACK1-230ENST00000513060 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
RACK1-230ENST00000513060 CD47Q08722 323 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms