RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 TTYH1Q9H313 450 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-215ENST00000512632 POLE3Q9NRF9 147 aa8.43□□□□□ -1.06
LIMCH1-215ENST00000512632 A0A1W2PQF6 199 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 hCG_1807616A0A1W2PRN6 198 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 A6NCN8 305 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 PPM1BO75688 479 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 TACSTD2P09758 323 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CT45A8P0DMV1 189 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CT45A9P0DMV2 189 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF35P13682 527 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 H2BFSP57053 126 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 RAB38P57729 211 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZMYND11Q15326 602 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CT45A2Q5DJT8 189 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ELFN2Q5R3F8 820 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF626Q68DY1 528 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 OR4C16Q8NGL9 310 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 C16orf52Q8NHV5 167 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 LAMP5Q9UJQ1 280 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 IGKV1D-42A0A075B6H8 117 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF749O43361 778 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SUSD5O60279 629 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 HPGDP15428 266 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ALG10Q5BKT4 473 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GPAT4Q86UL3 456 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ADGRG3Q86Y34 549 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZBTB44Q8NCP5 570 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC37A2Q8TED4 501 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 EMC3Q9P0I2 261 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 MYEF2Q9P2K5 600 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 KCNMB2Q9Y691 235 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 MUC22E2RYF6 1773 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SPEGQ15772 3267 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 UBE2QL1A1L167 161 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SULT1B1O43704 296 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 APBB3O95704 486 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CD14P08571 375 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 C4BPBP20851 252 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SEC61A1P61619 476 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GRM7Q14831 915 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CD226Q15762 336 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC35D3Q5M8T2 416 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 DCAF12L2Q5VW00 463 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 OR51S1Q8NGJ8 323 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CCDC74AQ96AQ1 378 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF524Q96C55 264 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 AMELYQ99218 206 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SFXN1Q9H9B4 322 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 C12orf4Q9NQ89 552 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CDV3Q9UKY7 258 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 C17orf51A8MQB3 221 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 DOK2O60496 412 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GLSO94925 669 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 AKR7A3O95154 331 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 NMBP08949 121 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GTF2F2P13984 249 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 IKZF1Q13422 519 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF684Q5T5D7 378 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC35D2Q76EJ3 337 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 BCORP1Q8N888 145 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 ATOH1Q92858 354 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 PMM1Q92871 262 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 LCORQ96JN0 433 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 CMTM3Q96MX0 182 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 SYT4Q9H2B2 425 aa8.42□□□□□ -1.06
LIMCH1-215ENST00000512632 A0A0J9YY10 115 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OR2M5A3KFT3 312 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 GOSR2O14653 212 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 SIGLEC5O15389 551 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 HLA-DQA2P01906 255 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 LPLP06858 475 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 S100A11P31949 105 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 NUP62P37198 522 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 DLX5P56178 289 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 SIGLEC14Q08ET2 396 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OR7E24Q6IFN5 339 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 Q6ZSR6 202 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC16A9Q7RTY1 509 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 SPICQ8N5J4 248 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OR6M1Q8NGM8 313 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OR2G2Q8NGZ5 317 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 C11orf98E9PRG8 122 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 NPIPB9F8W1W9 429 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 EGFP01133 1207 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 HOXD4P09016 255 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 CALCBP10092 127 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 MAZP56270 477 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 PRPS1P60891 318 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF141Q15928 474 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OLFML2AQ68BL7 652 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 LRRTM1Q86UE6 522 aa8.41□□□□□ -1.06
LIMCH1-215ENST00000512632 OOSP2Q86WS3 158 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms