RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 KIAA1549Q9HCM3 1950 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 TRAV36DV7A0A075B6V5 113 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 PINLYPA6NC86 204 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 MBD3L4A6NDZ8 208 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 MBD3L5A6NJ08 208 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 A8MVM7 634 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 SEC14L2O76054 403 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 HRGP04196 525 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 CDK1P06493 297 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 PRKCAP17252 672 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 POU1F1P28069 291 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 TACR3P29371 465 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 SOX3P41225 446 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ASCL1P50553 236 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 KRTAP1-1Q07627 177 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF239Q16600 458 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 KRTAP24-1Q3LI83 254 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 FAM69AQ5T7M9 428 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 SYT6Q5T7P8 510 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 AADACL4Q5VUY2 407 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 UBE2UQ5VVX9 321 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 PRSS57Q6UWY2 283 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DPY19L2P2Q6ZN68 376 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 MDGA2Q7Z553 956 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 OAFQ86UD1 273 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 EGFL6Q8IUX8 553 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 GID4Q8IVV7 300 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 TMCO5AQ8N6Q1 288 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF540Q8NDQ6 660 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 BPIFB6Q8NFQ5 453 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 OR10G3Q8NGC4 313 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 OR13F1Q8NGS4 319 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 OR4Q3Q8NH05 313 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF563Q8TA94 476 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ASB15Q8WXK1 588 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 MUL1Q969V5 352 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DGCR14Q96DF8 476 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DOK1Q99704 481 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DSN1Q9H410 356 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 EGLN3Q9H6Z9 239 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 NRIP3Q9NQ35 241 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DEPPQ9NTK1 212 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 TBC1D23Q9NUY8 699 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 HAO2Q9NYQ3 351 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 B4GALT7Q9UBV7 327 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 CORINQ9Y5Q5 1042 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 SNX5Q9Y5X3 404 aa9.36□□□□□ -0.91
PDLIM5-217ENST00000512274 DVL2O14641 736 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SNPHO15079 494 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 KCNAB3O43448 404 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SCO2O43819 266 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 XPNPEP2O43895 674 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PRKYO43930 277 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 FAM20BO75063 409 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SAGP10523 405 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 ATP6V1B1P15313 513 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF17P17021 662 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 FUT1P19526 365 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 EEF1B2P24534 225 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 CXCR1P25024 350 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 FMO3P31513 532 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 CCR4P51679 360 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 GTF2A1P52655 376 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 CDH15P55291 814 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 RAB40BQ12829 278 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SNAPC1Q16533 368 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PLPPR5Q32ZL2 321 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 RIPPLY2Q5TAB7 128 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 TMEM236Q5W0B7 351 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC22A10Q63ZE4 541 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 KCTD8Q6ZWB6 473 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 ADGRG3Q86Y34 549 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 TMEM156Q8N614 296 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 TCEANCQ8N8B7 351 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 LRRC75AQ8NAA5 344 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 GATSQ8NAP1 163 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 OR2M3Q8NG83 312 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC25A43Q8WUT9 341 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 GGHQ92820 318 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 UBE2FQ969M7 185 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PIGTQ969N2 578 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 C1GALT1C1Q96EU7 318 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 LRR1Q96L50 414 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 SAMD8Q96LT4 415 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 COPS4Q9BT78 406 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PTDSS2Q9BVG9 487 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PTGES2Q9H7Z7 377 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 METTL7AQ9H8H3 244 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 TVP23BQ9NYZ1 205 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 KLRF1Q9NZS2 232 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
PDLIM5-217ENST00000512274 CHRNA9Q9UGM1 479 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms