RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 UBA52P62987 128 aaKnown RBP13.67□□□□□ -0.22
CXCL1-202ENST00000509101 IFFO1Q0D2I5 559 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 RAB39AQ14964 217 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 PDLIM3Q53GG5 364 aaPredicted RBP13.67□□□□□ -0.22
CXCL1-202ENST00000509101 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
CXCL1-202ENST00000509101 WDFY1Q8IWB7 410 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 C22orf15Q8WYQ4 148 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 SORT1Q99523 831 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 ZNF747Q9BV97 191 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 MED29Q9NX70 200 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 SLC7A8Q9UHI5 535 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 CORINQ9Y5Q5 1042 aa13.67□□□□□ -0.22
CXCL1-202ENST00000509101 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 TRAV36DV7A0A075B6V5 113 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
CXCL1-202ENST00000509101 LSP1P33241 339 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 CCL8P80075 99 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 LRRC74AQ0VAA2 488 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 GTDC1Q4AE62 458 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 OGFOD2Q6N063 350 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ZNF627Q7L945 461 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ADPRHL1Q8NDY3 354 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 TSPAN32Q96QS1 320 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ZBTB18Q99592 522 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 FOXB1Q99853 325 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ROPN1BQ9BZX4 212 aaPredicted RBP13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 ROPN1Q9HAT0 212 aaPredicted RBP13.66□□□□□ -0.22
CXCL1-202ENST00000509101 TAAR3PQ9P1P4 343 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 KLHL14Q9P2G3 628 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
CXCL1-202ENST00000509101 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 CMYA5Q8N3K9 4069 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 LOC102725191A0A1B0GVB3 256 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 TMEM247A6NEH6 219 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 HNRNPCL2B2RXH8 293 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 HNRNPCL1O60812 293 aaKnown RBP13.65□□□□□ -0.22
CXCL1-202ENST00000509101 UBL3O95164 117 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 ANP32DO95626 131 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 CLPTM1O96005 669 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 PATE4P0C8F1 98 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 FAM157BP0CG42 384 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 SLC1A6P48664 564 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 ZP4Q12836 540 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 RGS7BPQ6MZT1 257 aaPredicted RBP13.65□□□□□ -0.22
CXCL1-202ENST00000509101 TMEM154Q6P9G4 183 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 SHISA2Q6UWI4 295 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 ZNF771Q7L3S4 317 aaPredicted RBP13.65□□□□□ -0.22
CXCL1-202ENST00000509101 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 OR6N1Q8NGY5 312 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 TXNDC15Q96J42 360 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 LRR1Q96L50 414 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 TMEM109Q9BVC6 243 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 OR51B6Q9H340 312 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 TPT1P8Q9HAU6 139 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 C12orf10Q9HB07 376 aa13.65□□□□□ -0.22
CXCL1-202ENST00000509101 HINT3Q9NQE9 182 aaKnown RBP13.65□□□□□ -0.22
CXCL1-202ENST00000509101 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
CXCL1-202ENST00000509101 A0A087WUJ7 227 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 A0A1B0GWA3 101 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 J3QLI3 93 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 SDHDO14521 159 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 SERPINI2O75830 405 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 PRSS23O95084 383 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 IGHV2-5P01817 119 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 HTR2AP28223 471 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 DEFA6Q01524 100 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 SNX32Q86XE0 403 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 MIER2Q8N344 545 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 FGFBP3Q8TAT2 258 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 VPS33AQ96AX1 596 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 DENND2DQ9H6A0 471 aaPredicted RBP13.64□□□□□ -0.23
CXCL1-202ENST00000509101 DDX28Q9NUL7 540 aaKnown RBP13.64□□□□□ -0.23
CXCL1-202ENST00000509101 PNPOQ9NVS9 261 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 FBXL3Q9UKT7 428 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 GPR45Q9Y5Y3 372 aa13.64□□□□□ -0.23
CXCL1-202ENST00000509101 IGHV1-69-2A0A0G2JMI3 117 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 CLDN25C9JDP6 229 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 TPD52L2O43399 206 aaKnown RBP13.63□□□□□ -0.23
CXCL1-202ENST00000509101 HKR1P10072 659 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 BGNP21810 368 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 KLF3P57682 345 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms