RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 DEPDC4Q8N2C3 294 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 OR6N1Q8NGY5 312 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 SMAP2Q8WU79 429 aaPredicted RBP13.17□□□□□ -0.3
TRIO-211ENST00000508343 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 NEUROG1Q92886 237 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 FBXW5Q969U6 566 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
TRIO-211ENST00000508343 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
TRIO-211ENST00000508343 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 ENPP4Q9Y6X5 453 aa13.17□□□□□ -0.3
TRIO-211ENST00000508343 ZNF469Q96JG9 3925 aaPredicted RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 ARPC4-TTLL3A0A0A6YYG9 625 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 ZNF99A8MXY4 864 aaPredicted RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 B2RBV5 119 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 PRSS23O95084 383 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 BCL10O95999 233 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 IFI30P13284 250 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 FUT4P22083 530 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 AQP2P41181 271 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 CSNK1A1P48729 337 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 RBM15BQ8NDT2 890 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 TMEM171Q8WVE6 324 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 ULBP2Q9BZM5 246 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 NELFAQ9H3P2 528 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 NMNAT1Q9HAN9 279 aaPredicted RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 MOV10Q9HCE1 1003 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 LAMP3Q9UQV4 416 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 FAM32AQ9Y421 112 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 ARID1AO14497 2285 aa13.16□□□□□ -0.3
TRIO-211ENST00000508343 TEP1Q99973 2627 aaKnown RBP13.16□□□□□ -0.3
TRIO-211ENST00000508343 A0A087WUU8 490 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 A0A1W2PRG6 482 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 PIP5K1CO60331 668 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 F13BP05160 661 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 DANCRP0C864 163 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 RHCEP18577 417 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 CDH11P55287 796 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 ADAM8P78325 824 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
TRIO-211ENST00000508343 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIO-211ENST00000508343 PRKCDQ05655 676 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 LAPTM4AQ15012 233 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 SHEQ5VZ18 495 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 ZNF730Q6ZMV8 503 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 NRMQ8IXM6 262 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 CDK20Q8IZL9 346 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
TRIO-211ENST00000508343 TMEM54Q969K7 222 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 ZNF566Q969W8 418 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.3
TRIO-211ENST00000508343 PYURFQ96I23 114 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 C7orf34Q96L11 122 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 GLTPQ9NZD2 209 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 NDUFAF4Q9P032 175 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
TRIO-211ENST00000508343 E7EQL1 145 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 ARPC2O15144 300 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 ARHGEF9O43307 516 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 PAX1P15863 534 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 MAKP20794 623 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 CALB2P22676 271 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 RPS4XP62701 263 aaKnown RBP13.14□□□□□ -0.31
TRIO-211ENST00000508343 TUBA1BP68363 451 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 TUBA4AP68366 448 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 MELKQ14680 651 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 PGGHGQ32M88 737 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 C3orf36Q3SXR2 165 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 MBOAT2Q6ZWT7 520 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 FAM86B1Q8N7N1 296 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 MOSPD2Q8NHP6 518 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 HEATR1Q9H583 2144 aaKnown RBP13.14□□□□□ -0.31
TRIO-211ENST00000508343 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 CRNNQ9UBG3 495 aaPredicted RBP13.14□□□□□ -0.31
TRIO-211ENST00000508343 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 HIF3AQ9Y2N7 669 aa13.14□□□□□ -0.31
TRIO-211ENST00000508343 IGHV1-18A0A0C4DH31 117 aa13.13□□□□□ -0.31
TRIO-211ENST00000508343 A0A1W2PRQ8 180 aa13.13□□□□□ -0.31
TRIO-211ENST00000508343 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms