RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CALHM3Q86XJ0 350 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 ANKS4BQ8N8V4 417 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 PCDHAC1Q9H158 963 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 TRAPPC13A5PLN9 417 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
RAB28-205ENST00000508274 CRLF1O75462 422 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 VIMP08670 466 aaKnown RBP12.38□□□□□ -0.43
RAB28-205ENST00000508274 OR4A8P0C604 315 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 BMP4P12644 408 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 B4GALT1P15291 398 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 PAX7P23759 505 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 BIDP55957 195 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
RAB28-205ENST00000508274 MELKQ14680 651 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 CARM1Q86X55 608 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 OR8J3Q8NGG0 315 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 OR6N1Q8NGY5 312 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 C10orf105Q8TEF2 133 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 FAM168AQ92567 244 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 LRR1Q96L50 414 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 ZNF426Q9BUY5 554 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 ULBP2Q9BZM5 246 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 TAS2R5Q9NYW4 299 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
RAB28-205ENST00000508274 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
RAB28-205ENST00000508274 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 SVEP1Q4LDE5 3571 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 LOC100653049A0A140TA62 436 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 KRT34O76011 436 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 THBS4P35443 961 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 DSCR9P59020 149 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 GUCY1A3Q02108 690 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 PIGFQ07326 219 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 ZNF583Q96ND8 569 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 FOXB1Q99853 325 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 B3GAT2Q9NPZ5 323 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 MEPEQ9NQ76 525 aaPredicted RBP12.37□□□□□ -0.43
RAB28-205ENST00000508274 NANSQ9NR45 359 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 YAE1D1Q9NRH1 226 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
RAB28-205ENST00000508274 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 BBIP1A8MTZ0 92 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 PDE5AO76074 875 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 OR6A2O95222 327 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
RAB28-205ENST00000508274 CD79AP11912 226 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 ARR3P36575 388 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 TMEM249Q2WGJ8 235 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 COQ5Q5HYK3 327 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 DEF8Q6ZN54 512 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 SLC35D2Q76EJ3 337 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 SLC46A3Q7Z3Q1 461 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 OR4F15Q8NGB8 312 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 PFN4Q8NHR9 129 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 PROX1Q92786 737 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 MPP4Q96JB8 637 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 ZNF75AQ96N20 296 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 TNFRSF13CQ96RJ3 184 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 VRK1Q99986 396 aaPredicted RBP12.36□□□□□ -0.43
RAB28-205ENST00000508274 PLK3Q9H4B4 646 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
RAB28-205ENST00000508274 ARMCX1Q9P291 453 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 POFUT2Q9Y2G5 429 aa12.36□□□□□ -0.43
RAB28-205ENST00000508274 B9A039 149 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 RNF13O43567 381 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 TLX2O43763 284 aaPredicted RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 UMPSP11172 480 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 SLC25A16P16260 332 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 OR1E2P47887 323 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 UGT2B15P54855 530 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 LOXL1Q08397 574 aaPredicted RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZP4Q12836 540 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 SNTB2Q13425 540 aaKnown RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 EFNB3Q15768 340 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 GSG1Q2KHT4 349 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZCCHC24Q8N2G6 241 aaKnown RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 POU5F2Q8N7G0 328 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 FGFBP3Q8TAT2 258 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 TMEM255BQ8WV15 326 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 MDFIQ99750 246 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 SH3GL1Q99961 368 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms