RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 LAIR2Q6ISS4 152 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 NPEPL1Q8NDH3 523 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 BBS1Q8NFJ9 593 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 OR9Q1Q8NGQ5 310 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 ZNF519Q8TB69 540 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 FNDC9Q8TBE3 224 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 ZPLD1Q8TCW7 415 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 RERGLQ9H628 205 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 SRA1Q9HD15 236 aaKnown RBP15.56■□□□□ 0.08
RNF4-209ENST00000507784 AMBNQ9NP70 447 aa15.56■□□□□ 0.08
RNF4-209ENST00000507784 SH3D21A4FU49 640 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 OR6C68A6NDL8 312 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 NPIPB13A6NJU9 1138 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 SLC22A20A6NK97 555 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 SNTNA6NMZ2 147 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 KDM4EB2RXH2 506 aaPredicted RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 NPIPB4C9JG80 1138 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 M0R3G1 203 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 SLC1A7O00341 560 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 AKAP8O43823 692 aaKnown RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 XPNPEP2O43895 674 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 TRMUO75648 421 aaKnown RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 ABOP16442 354 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 CDH11P55287 796 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 CLRN1P58418 232 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 CSNK2BP67870 215 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 TEKQ02763 1124 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 POU4F3Q15319 338 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 TMEM201Q5SNT2 666 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 NXNL2Q5VZ03 156 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 FAM205BPQ63HN1 556 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 GTF2IRD2BQ6EKJ0 949 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 GFRALQ6UXV0 394 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 NHLRC1Q6VVB1 395 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 HDDC2Q7Z4H3 204 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 FGD2Q7Z6J4 655 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 ADCK1Q86TW2 530 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 GTF2IRD2Q86UP8 949 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 SYT14Q8NB59 555 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 ABHD3Q8WU67 409 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 PTP4A1Q93096 173 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 ZNF385AQ96PM9 386 aaKnown RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 HCAR1Q9BXC0 346 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 YTHDF1Q9BYJ9 559 aaKnown RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 RPRD1BQ9NQG5 326 aaKnown RBP15.55■□□□□ 0.08
RNF4-209ENST00000507784 CLEC4AQ9UMR7 237 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 TPRKBQ9Y3C4 175 aa15.55■□□□□ 0.08
RNF4-209ENST00000507784 CHD8Q9HCK8 2581 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 MGAQ8IWI9 3026 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 EIF4E1BA6NMX2 242 aaKnown RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 ZNF716A6NP11 495 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 AHRRA9YTQ3 701 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 PTGES3LE9PB15 166 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 AQP8O94778 261 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 TNFAIP8O95379 198 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 GYPBP06028 91 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 CLUP10909 449 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 EEF1B2P24534 225 aaKnown RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 CENPAP49450 140 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 TDGF1P3P51864 188 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 RUNX1T1Q06455 604 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 LGALS3BPQ08380 585 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 DBPQ10586 325 aaPredicted RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 APOFQ13790 326 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 SF3B4Q15427 424 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■□□□□ 8.2
RNF4-209ENST00000507784 SLC25A30Q5SVS4 291 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 AADACL4Q5VUY2 407 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 NIPAL3Q6P499 406 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 MEPCEQ7L2J0 689 aaKnown RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 AAED1Q7RTV5 226 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 GID4Q8IVV7 300 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 WDFY1Q8IWB7 410 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 ZNF540Q8NDQ6 660 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 RNF128Q8TEB7 428 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 RFKQ969G6 155 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 ADAD1Q96M93 576 aaKnown RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 CALHM2Q9HA72 323 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 KLHL9Q9P2J3 617 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 BLOC1S6Q9UL45 172 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 RPL36Q9Y3U8 105 aaKnown RBP15.54■□□□□ 0.08
RNF4-209ENST00000507784 ZNF175Q9Y473 711 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 FLVCR1Q9Y5Y0 555 aa15.54■□□□□ 0.08
RNF4-209ENST00000507784 PRSS37A4D1T9 235 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 MAGEA13PA6NCF6 341 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 FAM171A2A8MVW0 826 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 PRODHO43272 600 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 TGM6O95932 706 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 IGHG1P01857 330 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 LYNP07948 512 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 PYCR1P32322 319 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 CXCR4P61073 352 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 RNPS1Q15287 305 aaKnown RBP15.53■□□□□ 0.08
RNF4-209ENST00000507784 TUSC5Q8IXB3 177 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 ZIC4Q8N9L1 334 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 OR51L1Q8NGJ5 315 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 OR6X1Q8NH79 312 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 ZNF566Q969W8 418 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 SLC25A44Q96H78 314 aaPredicted RBP15.53■□□□□ 0.08
RNF4-209ENST00000507784 TSSK2Q96PF2 358 aa15.53■□□□□ 0.08
RNF4-209ENST00000507784 RBP7Q96R05 134 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms