RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 AKAP10O43572 662 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 ZNF500O60304 480 aaPredicted RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 SMIM24O75264 130 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 C2P06681 752 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 IFI6P09912 130 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CD28P10747 220 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 RPS2P15880 293 aaKnown RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 TACR3P29371 465 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 SSTR1P30872 391 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 HTR6P50406 440 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 BTG1P62324 171 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CAMK2DQ13557 499 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 XP32Q5T750 250 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CARD17Q5XLA6 110 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 OLIG3Q7RTU3 272 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 PDZD9Q8IXQ8 264 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 DDIASQ8IXT1 998 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 WFDC9Q8NEX5 89 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 DCAKDQ8WVC6 231 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 FAM120BQ96EK7 910 aaKnown RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 PLEKHA8Q96JA3 519 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 EGLN2Q96KS0 407 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 SDF2Q99470 211 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CDH20Q9HBT6 801 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 KCNE5Q9UJ90 142 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 OSGIN1Q9UJX0 560 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 ZNF225Q9UK10 706 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 MKLN1Q9UL63 735 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 FAF1Q9UNN5 650 aaPredicted RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 POFUT2Q9Y2G5 429 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 STX16-NPEPL1H3BU86 382 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 STX16O14662 325 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 ZNF208O43345 1280 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 FCMRO60667 390 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 BCAS1O75363 584 aaPredicted RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 FBXO24O75426 580 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 URI1O94763 535 aaPredicted RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 TOX4O94842 621 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 VAMP5O95183 116 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 KLHL2O95198 593 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 ZNF205O95201 554 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 SERPINA5P05154 406 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 F13BP05160 661 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 ZNF43P17038 809 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 GTF2E2P29084 291 aaKnown RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 HTR3AP46098 478 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 POLR2HP52434 150 aaKnown RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 EFNB2P52799 333 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 UCP2P55851 309 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 DCTN2Q13561 401 aaKnown RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 TP53BP2Q13625 1128 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 C1DQ13901 141 aaKnown RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 ZNF141Q15928 474 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 ZNF385BQ569K4 471 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 EXOSC6Q5RKV6 272 aaKnown RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 MROH9Q5TGP6 573 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 SLC27A4Q6P1M0 643 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 HMGN2P46Q86SG4 172 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 RNF130Q86XS8 419 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 KLBQ86Z14 1044 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 PAQR4Q8N4S7 273 aaPredicted RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 ARFGAP2Q8N6H7 521 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 FITM2Q8N6M3 262 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 SLC30A7Q8NEW0 376 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 SDR9C7Q8NEX9 313 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 Q8NFD4 153 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 PYROXD1Q8WU10 500 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 LHX4Q969G2 390 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 PPCDCQ96CD2 204 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 BAG1Q99933 345 aaPredicted RBP5.98□□□□□ -1.45
VCAN-207ENST00000507162 CHID1Q9BWS9 393 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 EXD2Q9NVH0 621 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 VPREB3Q9UKI3 123 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 TIMM22Q9Y584 194 aa5.98□□□□□ -1.45
VCAN-207ENST00000507162 IGHV1-69DA0A0B4J2H0 117 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 A0A1W2PRX2 142 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 CCDC189A1A4V9 331 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 ZSCAN5BA6NJL1 495 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 RNASEK-C17orf49H0YIS7 233 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 P2RY10O00398 339 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 ZFPL1O95159 310 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 IGHV1-69P01742 117 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 IGHV3-13P01766 116 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 B4GALT1P15291 398 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 CXCR1P25024 350 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 PGM1P36871 562 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 CFHR2P36980 270 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 HSD17B3P37058 310 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 MDH2P40926 338 aaKnown RBP5.97□□□□□ -1.45
VCAN-207ENST00000507162 CCT3P49368 545 aaKnown RBP5.97□□□□□ -1.45
VCAN-207ENST00000507162 P2RY4P51582 365 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 SLC35A2P78381 396 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 TNFAIP6P98066 277 aaPredicted RBP5.97□□□□□ -1.45
VCAN-207ENST00000507162 CLCQ05315 142 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 BNIP2Q12982 314 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 PMS2P3Q13401 168 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 IMPG1Q17R60 797 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 SPDYE7PQ495Y7 208 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 RUNDC3AQ59EK9 446 aa5.97□□□□□ -1.45
VCAN-207ENST00000507162 PHYHD1Q5SRE7 291 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms