RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RAP1BP61224 184 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 RAP1AP62834 184 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 PUDPQ08623 228 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 SELENBP1Q13228 472 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 OR7A5Q15622 319 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 TRAM1Q15629 374 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF239Q16600 458 aaKnown RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 MS4A18Q3C1V0 323 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF829Q3KNS6 432 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 MESTQ5EB52 335 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 PRAMEF20Q5VT98 475 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 EEF1A1P5Q5VTE0 462 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 FAM205BPQ63HN1 556 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 SLC6A19Q695T7 634 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 TIGD3Q6B0B8 471 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 C3orf33Q6P1S2 294 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 CD200R1LQ6Q8B3 271 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 B3GLCTQ6Y288 498 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 LSRQ86X29 649 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 SLC35F2Q8IXU6 374 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 GTPBP8Q8N3Z3 284 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 OR1J4Q8NGS1 313 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF417Q8TAU3 575 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF519Q8TB69 540 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 HAVCR2Q8TDQ0 301 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ADAMTS17Q8TE56 1095 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 S100ZQ8WXG8 99 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 THAP4Q8WY91 577 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZMYND19Q96E35 227 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF587Q96SQ5 575 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 NPAS1Q99742 590 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 CENPOQ9BU64 300 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 MARCH7Q9H992 704 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 CHST11Q9NPF2 352 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 RPRD1BQ9NQG5 326 aaKnown RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 VSX1Q9NZR4 365 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 TEKT2Q9UIF3 430 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 FBXL2Q9UKC9 423 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 TRAPPC4Q9Y296 219 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 GSTK1Q9Y2Q3 226 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 MRPS18CQ9Y3D5 142 aaKnown RBP7.25□□□□□ -1.25
COL4A5-208ENST00000505728 HRH3Q9Y5N1 445 aa7.25□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF462Q96JM2 2506 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 A0A087WV48 116 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 A0A1W2PQL4 384 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 PRSS37A4D1T9 235 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 METTL15A6NJ78 407 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CENPBD1B2RD01 187 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF670-ZNF695F2Z2N8 137 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ARHGEF9O43307 516 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 TFP02787 698 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CD1AP06126 327 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 MRPL3P09001 348 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 INHBBP09529 407 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 IMPDH2P12268 514 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 LIFP15018 202 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 SRD5A2P31213 254 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 FGF9P31371 208 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 SOX6P35712 828 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CYB561P49447 251 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 GBX2P52951 348 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 RPS3AP61247 264 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ACTA2P62736 377 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ACTG2P63267 376 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 AIMP2Q13155 320 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 DCTN2Q13561 401 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ATP1A4Q13733 1029 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 INPP5JQ15735 1006 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ACKR1Q16570 336 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ZNF404Q494X3 552 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CDONQ4KMG0 1287 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CRTC2Q53ET0 693 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 IGF2-ASQ6U949 168 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 SLC16A9Q7RTY1 509 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 KCTD20Q7Z5Y7 419 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 PXKQ7Z7A4 578 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ZBTB46Q86UZ6 589 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 KLBQ86Z14 1044 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 CROCCP3Q8IVE0 287 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 OR6Q1Q8NGQ2 317 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 MCFD2Q8NI22 146 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ZPLD1Q8TCW7 415 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 PSMF1Q92530 271 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 NKD1Q969G9 470 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 BORCS5Q969J3 196 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 NXPE2Q96DL1 559 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 THOC3Q96J01 351 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ARL5BQ96KC2 179 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 FER1L6-AS2Q96M78 137 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 KCTD7Q96MP8 289 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 TBX5Q99593 518 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 TIMP4Q99727 224 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 MED18Q9BUE0 208 aa7.24□□□□□ -1.25
COL4A5-208ENST00000505728 SLIRPQ9GZT3 109 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 NXF2Q9GZY0 626 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 ISG20L2Q9H9L3 353 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 SRA1Q9HD15 236 aaKnown RBP7.24□□□□□ -1.25
COL4A5-208ENST00000505728 TRIM36Q9NQ86 728 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms