RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GEMIN6Q8WXD5 167 aaKnown RBP1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 RGP1Q92546 391 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 EFHD2Q96C19 240 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 RSPH9Q9H1X1 276 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 POLDIP2Q9Y2S7 368 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 CEMIPQ8WUJ3 1361 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 A0A1B0GVI7 797 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 A8MUU9 505 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 PRRG1O14668 218 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCNKO75909 580 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 MFN2O95140 757 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 UBTFL1P0CB47 393 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 EPB41P11171 864 aaKnown RBP1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 IL12AP29459 219 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 RGS4P49798 205 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 KLRB1Q12918 225 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 OR5I1Q13606 314 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 HES5Q5TA89 166 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 RAET1LQ5VY80 246 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 BIVMQ86UB2 503 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 LGI3Q8N145 548 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 SYT14Q8NB59 555 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 OR10G4Q8NGN3 311 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 SGK3Q96BR1 496 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 TGM7Q96PF1 710 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 PLA2G12AQ9BZM1 189 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 LRRN3Q9H3W5 708 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 COQ10BQ9H8M1 238 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 NHEJ1Q9H9Q4 299 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 WFDC1Q9HC57 220 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNRD1Q9P1U0 126 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 TMCO1Q9UM00 188 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 KCNIP3Q9Y2W7 256 aa1.52□□□□□ -2.17
HMGB1P29-201ENST00000505659 WDR62O43379 1518 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 GPATCH8Q9UKJ3 1502 aaKnown RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 TNS2Q63HR2 1409 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGLV3-12A0A075B6K2 115 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 SGK1O00141 431 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 KMOO15229 486 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF207O43670 478 aaKnown RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 GAPDHP04406 335 aaKnown RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 POLR2MP0CAP2 368 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 SMIM10L1P0DMW3 83 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 FOLR1P15328 257 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 GNA11P29992 359 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 CYB561P49447 251 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 RPS21P63220 83 aaKnown RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 IRX3P78415 501 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 MEF2BQ02080 365 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 INAQ16352 499 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 DUX4L9Q6RFH8 374 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 STRADAQ7RTN6 431 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 ECHDC2Q86YB7 292 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 FAM133AQ8N9E0 248 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 SDR42E1Q8WUS8 393 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 MAIP1Q8WWC4 291 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 UBE2E3Q969T4 207 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 SMIM10Q96HG1 83 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 TSSK3Q96PN8 268 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF229Q9UJW7 825 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 ODF2LQ9ULJ1 636 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 PACSIN2Q9UNF0 486 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 SHANK1Q9Y566 2161 aa1.51□□□□□ -2.17
HMGB1P29-201ENST00000505659 GPRASP1Q5JY77 1395 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 DHX57Q6P158 1386 aaKnown RBP1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGHV5-10-1A0A0J9YXX1 117 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 OR5B21A6NL26 309 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 RAD51BO15315 384 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 MED7O43513 233 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 RAMP3O60896 148 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGHV1-8P0DP01 117 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCDC130P13994 396 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 ATP6V1C1P21283 382 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 CD34P28906 385 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 MDH1P40925 334 aaKnown RBP1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 NPBWR2P48146 333 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 CDC20Q12834 499 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 ERCC8Q13216 396 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 TATDN3Q17R31 274 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 TTC23Q5W5X9 447 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 LRP11Q86VZ4 500 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 PLA2G4DQ86XP0 818 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCDC50Q8IVM0 306 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 RNF139Q8WU17 664 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 CLCC1Q96S66 551 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 ADAP2Q9NPF8 381 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 UFSP2Q9NUQ7 469 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 RPH3ALQ9UNE2 315 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 TMEM14AQ9Y6G1 99 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 DOCK8Q8NF50 2099 aa1.5□□□□□ -2.17
HMGB1P29-201ENST00000505659 MSH6P52701 1360 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 FANCIQ9NVI1 1328 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGKV3D-11A0A0A0MRZ8 115 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 TMEM223A0PJW6 202 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 RGSL1A5PLK6 1076 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 METTL21EPA6NDL7 271 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 POLR2DO15514 142 aaKnown RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 PRKAB2O43741 272 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 TOM1O60784 492 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms