RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 SPEF1Q9Y4P9 236 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 A0A087WUU8 490 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 KPNA4O00629 521 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 TRAF3IP2O43734 574 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 IDH3BO43837 385 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 RAD51DO75771 328 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 CIB2O75838 187 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 UBL3O95164 117 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 NDUFB2O95178 105 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 LYPD3O95274 346 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 CRYAAP02489 173 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 APEHP13798 732 aaKnown RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 GSTM3P21266 225 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 SELENOPP49908 381 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 ELF3P78545 371 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 ROR2Q01974 943 aaKnown RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 COX10Q12887 443 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 ZBED5Q49AG3 693 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 FGD3Q5JSP0 725 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 NCMAPQ5T1S8 102 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 SEZ6L2Q6UXD5 910 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 COMTD1Q86VU5 262 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 NRMQ8IXM6 262 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM255BQ8WV15 326 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 PIK3IP1Q96FE7 263 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 ZC3HAV1LQ96H79 300 aaKnown RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 C7orf34Q96L11 122 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 MOGAT1Q96PD6 335 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 OR2M2Q96R28 347 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 TEX12Q9BXU0 123 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 RSPO3Q9BXY4 272 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 CXorf56Q9H5V9 222 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 REEP1Q9H902 201 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 CRLF2Q9HC73 371 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 MEPEQ9NQ76 525 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 BEX4Q9NWD9 120 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-220ENST00000505005 TAS2R5Q9NYW4 299 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 GLTPQ9NZD2 209 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 B3GAT1Q9P2W7 334 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 GRHPRQ9UBQ7 328 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 UNC79Q9P2D8 2635 aa8.67□□□□□ -1.02
NR1I3-220ENST00000505005 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 SLC22A23A1A5C7 686 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 C11orf98E9PRG8 122 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 GNGT2O14610 69 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 IMPA2O14732 288 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 CLOCKO15516 846 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 KLF4O43474 513 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 OR10H3O60404 316 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 RAMP1O60894 148 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 IGHMP01871 453 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 THY1P04216 161 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 OR8G3PP0DMU2 310 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 IFNGR1P15260 489 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ACADSP16219 412 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 CBLP22681 906 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 RPL4P36578 427 aaKnown RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 UGT2B15P54855 530 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 BIDP55957 195 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 RPL27P61353 136 aaKnown RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 PCBD1P61457 104 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 SPIBQ01892 262 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 LTBQ06643 244 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 RPL18Q07020 188 aaKnown RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 FLOT2Q14254 428 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ETFDHQ16134 617 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ACKR1Q16570 336 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 SLC36A2Q495M3 483 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 DNM1P34Q6PK57 102 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 DPY19L2P2Q6ZN68 376 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ADCK1Q86TW2 530 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 LRRC75A-AS1Q8N1F1 130 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 KDM8Q8N371 416 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF611Q8N823 705 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 OR4F15Q8NGB8 312 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 OR1J2Q8NGS2 313 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 SLC7A13Q8TCU3 470 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 GNPDA2Q8TDQ7 276 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 IPCEF1Q8WWN9 437 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 DNAJC9Q8WXX5 260 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 DNAJA3Q96EY1 480 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 TRMT61AQ96FX7 289 aaKnown RBP8.66□□□□□ -1.02
NR1I3-220ENST00000505005 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ALPK1Q96QP1 1244 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 FOXC2Q99958 501 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 WFDC6Q9BQY6 131 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 KATNB1Q9BVA0 655 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 GPR35Q9HC97 309 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 ST6GALNAC2Q9UJ37 374 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 BAIAP2Q9UQB8 552 aa8.66□□□□□ -1.02
NR1I3-220ENST00000505005 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms