RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CPEB3Q8NE35 698 aaKnown RBP10.45□□□□□ -0.74
LSM6-204ENST00000504181 OR4S1Q8NGB4 309 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 MRPL57Q9BQC6 102 aaKnown RBP10.45□□□□□ -0.74
LSM6-204ENST00000504181 EGLN1Q9GZT9 426 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
LSM6-204ENST00000504181 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 FOXJ3Q9UPW0 622 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
LSM6-204ENST00000504181 EIF3HO15372 352 aaKnown RBP eCLIP10.44□□□□□ -0.74
LSM6-204ENST00000504181 TSPAN9O75954 239 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 IGLL1P15814 213 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 ZNF43P17038 809 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 SDC1P18827 310 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 CXCR1P25024 350 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 IER3P46695 156 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 BPIFB3P59826 476 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 FGF12P61328 243 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 BTG1P62324 171 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 ZMYND11Q15326 602 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 MOGQ16653 247 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 CARD17Q5XLA6 110 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 ZNF662Q6ZS27 426 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 LRRC28Q86X40 367 aaPredicted RBP10.44□□□□□ -0.74
LSM6-204ENST00000504181 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 CNOT9Q92600 299 aaKnown RBP10.44□□□□□ -0.74
LSM6-204ENST00000504181 ZNF350Q9GZX5 532 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 MMP28Q9H239 520 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 CDH20Q9HBT6 801 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 EXOSC3Q9NQT5 275 aaKnown RBP10.44□□□□□ -0.74
LSM6-204ENST00000504181 BAIAP2L1Q9UHR4 511 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 JRKLQ9Y4A0 524 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 U3KQK5 164 aa10.44□□□□□ -0.74
LSM6-204ENST00000504181 ZSCAN5BA6NJL1 495 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 CEACAM18A8MTB9 384 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 MGRN1O60291 552 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 UBL3O95164 117 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 IGHV3-13P01766 116 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 SERPINA5P05154 406 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 MAP2K6P52564 334 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 PKNOX1P55347 436 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 CDK5R2Q13319 367 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 MFSD13AQ14CX5 517 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 KIAA0040Q15053 153 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 CHI3L2Q15782 390 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 ARHGAP11BQ3KRB8 267 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 DMRTC1Q5HYR2 192 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 CLEC6AQ6EIG7 209 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 PGBD2Q6P3X8 592 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 C16orf62Q7Z3J2 963 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 SLC30A7Q8NEW0 376 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 FGFBP3Q8TAT2 258 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 DACT3Q96B18 629 aaPredicted RBP10.43□□□□□ -0.74
LSM6-204ENST00000504181 THOC1Q96FV9 657 aaKnown RBP10.43□□□□□ -0.74
LSM6-204ENST00000504181 OR2M2Q96R28 347 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 NUDT16L1Q9BRJ7 211 aaKnown RBP10.43□□□□□ -0.74
LSM6-204ENST00000504181 PCGF1Q9BSM1 259 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 TMEM165Q9HC07 324 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 MID1IP1Q9NPA3 183 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 TMEM106BQ9NUM4 274 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 ACOXLQ9NUZ1 547 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 FBXL3Q9UKT7 428 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 POFUT2Q9Y2G5 429 aa10.43□□□□□ -0.74
LSM6-204ENST00000504181 PLSCR5A0PG75 271 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 AK1P00568 194 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 WNT2P09544 360 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 PNMTP11086 282 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 MATN1P21941 496 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 UQCRC2P22695 453 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 SOAT1P35610 550 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 MMP15P51511 669 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 KCNJ10P78508 379 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 PMS2P3Q13401 168 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TMEM255AQ5JRV8 349 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TYW3Q6IPR3 259 aaKnown RBP10.42□□□□□ -0.74
LSM6-204ENST00000504181 ZNF774Q6NX45 483 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TRIM46Q7Z4K8 759 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TMEM123Q8N131 208 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TMEM151AQ8N4L1 468 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 CFHR4Q92496 578 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 ZG16BQ96DA0 208 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 TBX15Q96SF7 602 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 CCT7Q99832 543 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 RRAGDQ9NQL2 400 aaPredicted RBP10.42□□□□□ -0.74
LSM6-204ENST00000504181 STK38LQ9Y2H1 464 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 SIGLEC9Q9Y336 463 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 WDR45Q9Y484 360 aa10.42□□□□□ -0.74
LSM6-204ENST00000504181 KIR2DS1A0A191URI9 304 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 C6orf47O95873 294 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 RPS2P15880 293 aaKnown RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 MSX2P35548 267 aaPredicted RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 UCP2P55851 309 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 ETF1P62495 437 aaKnown RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 C1DQ13901 141 aaKnown RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 C1orf140Q5VVS0 124 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 SLC35E4Q6ICL7 350 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 ZNF627Q7L945 461 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms