RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 SULF2Q8IWU5 870 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF441Q8N8Z8 693 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 SMPDL3BQ92485 455 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF524Q96C55 264 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 OMA1Q96E52 524 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 DCLRE1CQ96SD1 692 aaKnown RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 KCNJ15Q99712 375 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 KLHDC3Q9BQ90 382 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 PLEKHB1Q9UF11 243 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 ADAM18Q9Y3Q7 739 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 PCDHGB2Q9Y5G2 931 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 GABRPO00591 440 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ARPC3O15145 178 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 RGS5O15539 181 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 BCAP31P51572 246 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 FOXL2P58012 376 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 PSPHP78330 225 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF85Q03923 595 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 POU4F2Q12837 409 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 DNASE1L3Q13609 305 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF74Q16587 644 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 STEAP3Q658P3 488 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 SLC22A16Q86VW1 577 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 TUSC5Q8IXB3 177 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 OR4D9Q8NGE8 314 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF563Q8TA94 476 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ASB15Q8WXK1 588 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 WDFY2Q96P53 400 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 OR6C1Q96RD1 312 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 GPX7Q96SL4 187 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 CTRCQ99895 268 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 KATNB1Q9BVA0 655 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 POLE4Q9NR33 117 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF275Q9NSD4 429 aaPredicted RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 IGLV3-12A0A075B6K2 115 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 IGHV5-10-1A0A0J9YXX1 117 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 A0A1W2PQD3 144 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 AGRPO00253 132 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 RNF13O43567 381 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 TIAF1O95411 115 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 MT-ND5P03915 603 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 TACR3P29371 465 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
USP46-204ENST00000503060 PNLIPRP2P54317 469 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 PRPS1P60891 318 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 ACTC1P68032 377 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 ACTA1P68133 377 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 GLO1Q04760 184 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 ISXQ2M1V0 245 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 HFEQ30201 348 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 MARCH3Q86UD3 253 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 SLC38A9Q8NBW4 561 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 ZNF248Q8NDW4 579 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 EDAQ92838 391 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 TNFRSF14Q92956 283 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 TRIM36Q9NQ86 728 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 CMAHPQ9Y471 501 aa10.51□□□□□ -0.73
USP46-204ENST00000503060 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
USP46-204ENST00000503060 IGHV3-20A0A0C4DH32 117 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 SLC35F4A4IF30 521 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 CD8B2A6NJW9 211 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 CD8BP10966 210 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 ABCD3P28288 659 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 EIF1AXP47813 144 aaKnown RBP10.5□□□□□ -0.73
USP46-204ENST00000503060 ERVK-25P63136 954 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 EGR4Q05215 589 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 IL24Q13007 206 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 DYRK1AQ13627 763 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 NKAIN1Q4KMZ8 207 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 TMEM91Q6ZNR0 172 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 LAX1Q8IWV1 398 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 NPEPL1Q8NDH3 523 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 C17orf47Q8NEP4 570 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 SMAP2Q8WU79 429 aaPredicted RBP10.5□□□□□ -0.73
USP46-204ENST00000503060 ZMYND19Q96E35 227 aaPredicted RBP10.5□□□□□ -0.73
USP46-204ENST00000503060 DDOQ99489 341 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
USP46-204ENST00000503060 MMP25Q9NPA2 562 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 HIF3AQ9Y2N7 669 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 A0A1W2PN81 502 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 SMIM30A4D0T7 59 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 C5orf51A6NDU8 294 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 CASKO14936 926 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 GMFGO60234 142 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 EIF4E2O60573 245 aaKnown RBP10.5□□□□□ -0.73
USP46-204ENST00000503060 SCRG1O75711 98 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 SPDEFO95238 335 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 PNPP00491 289 aa10.5□□□□□ -0.73
USP46-204ENST00000503060 CFIP05156 583 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms