RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 BHLHE22Q8NFJ8 381 aaPredicted RBP9.29□□□□□ -0.92
SNCA-207ENST00000502987 DYDC1Q8WWB3 177 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 CKAP2Q8WWK9 683 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 TLCD1Q96CP7 247 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 NELFAQ9H3P2 528 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 SLC25A37Q9NYZ2 338 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 SLAMF8Q9P0V8 285 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 KLHL14Q9P2G3 628 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 B3GAT1Q9P2W7 334 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 TESQ9UGI8 421 aaKnown RBP9.29□□□□□ -0.92
SNCA-207ENST00000502987 CORO2BQ9UQ03 480 aa9.29□□□□□ -0.92
SNCA-207ENST00000502987 LOC102725191A0A1B0GVB3 256 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 LRP5LA4QPB2 252 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 C11orf98E9PRG8 122 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 STAMBPO95630 424 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 HPRP00739 348 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 HLA-HP01893 362 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 IFNGR1P15260 489 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 APEX1P27695 318 aaKnown RBP9.28□□□□□ -0.92
SNCA-207ENST00000502987 SRP14P37108 136 aaKnown RBP9.28□□□□□ -0.92
SNCA-207ENST00000502987 PTDSS1P48651 473 aaKnown RBP9.28□□□□□ -0.92
SNCA-207ENST00000502987 CHN2P52757 468 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 SRSF2Q01130 221 aaKnown RBP9.28□□□□□ -0.92
SNCA-207ENST00000502987 GALK2Q01415 458 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 GSG1Q2KHT4 349 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 PHYHD1Q5SRE7 291 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 LRIF1Q5T3J3 769 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 C6orf89Q6UWU4 347 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 FUNDC1Q8IVP5 155 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 C20orf196Q8IYI0 205 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 SMYD1Q8NB12 490 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 TXNDC15Q96J42 360 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 DOK1Q99704 481 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 EBF4Q9BQW3 602 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 CCDC28BQ9BUN5 200 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 ULBP2Q9BZM5 246 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 TPK1Q9H3S4 243 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 ZNF442Q9H7R0 627 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 SLCO1B3Q9NPD5 702 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 MED29Q9NX70 200 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 VAPAQ9P0L0 249 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 ANGPT4Q9Y264 503 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 CORINQ9Y5Q5 1042 aa9.28□□□□□ -0.92
SNCA-207ENST00000502987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.27□□□□□ -0.92
SNCA-207ENST00000502987 IGKV1D-42A0A075B6H8 117 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 ZNF503-AS2A6NEH8 195 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LRRN3E7EW58 273 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
SNCA-207ENST00000502987 RAB36O95755 333 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 BGLAPP02818 100 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 ADORA3P0DMS8 318 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 B4GALT1P15291 398 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LSP1P33241 339 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 CDH12P55289 794 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 RAB1AP62820 205 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 PUDPQ08623 228 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 SQLEQ14534 574 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 CYP51A1Q16850 503 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 CR1LQ2VPA4 569 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 AGBL2Q5U5Z8 902 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LYPD4Q6UWN0 246 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 COMTD1Q86VU5 262 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 MSRB3Q8IXL7 192 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 CDK20Q8IZL9 346 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 TMEM123Q8N131 208 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 C10orf111Q8N326 155 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 SCAIQ8N9R8 606 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 ADPRHL1Q8NDY3 354 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 HIPK4Q8NE63 616 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 SLC26A7Q8TE54 656 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 LRR1Q96L50 414 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 SNX18Q96RF0 628 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 MCHR1Q99705 422 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 RSPO3Q9BXY4 272 aaPredicted RBP9.27□□□□□ -0.93
SNCA-207ENST00000502987 TMEM38AQ9H6F2 299 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 NOX3Q9HBY0 568 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 MRPL39Q9NYK5 338 aaKnown RBP9.27□□□□□ -0.93
SNCA-207ENST00000502987 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
SNCA-207ENST00000502987 A0A0B4J2E0 115 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 A0A1B0GX12 115 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 TMEM129A0AVI4 362 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
SNCA-207ENST00000502987 M0R3H8 397 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 PLPP3O14495 311 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 SYNGR3O43761 229 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 HIST1H2ABP04908 130 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 UMPSP11172 480 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 HOXB9P17482 250 aaPredicted RBP9.26□□□□□ -0.93
SNCA-207ENST00000502987 TCN1P20061 433 aaPredicted RBP9.26□□□□□ -0.93
SNCA-207ENST00000502987 NR4A1P22736 598 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 CSNK1A1P48729 337 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 BIDP55957 195 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 KRTAP24-1Q3LI83 254 aa9.26□□□□□ -0.93
SNCA-207ENST00000502987 BEND6Q5SZJ8 279 aaPredicted RBP9.26□□□□□ -0.93
SNCA-207ENST00000502987 LIPNQ5VXI9 398 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms