RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TRA2BP62995 288 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 RPP38P78345 283 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 VLDLRP98155 873 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 IL5RAQ01344 420 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 HMGCS1Q01581 520 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 IRF8Q02556 426 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ZNF763Q0D2J5 394 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 COX10Q12887 443 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 RPA4Q13156 261 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 CHIT1Q13231 466 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ILKQ13418 452 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 GPNMBQ14956 572 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ARHGAP19Q14CB8 494 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 MICAQ29983 383 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 TMEM44Q2T9K0 475 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ANKDD1AQ495B1 522 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ZNF658BQ4V348 819 aaPredicted RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 IFI44LQ53G44 452 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 KLHL26Q53HC5 615 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 CARD16Q5EG05 197 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 HENMT1Q5T8I9 393 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 CPTPQ5TA50 214 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 C22orf39Q6P5X5 142 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 DOK6Q6PKX4 331 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 SLC25A47Q6Q0C1 308 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 RBPMS2Q6ZRY4 209 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 NCCRP1Q6ZVX7 275 aaPredicted RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 ANKRD33Q7Z3H0 272 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 TMEM179BQ7Z7N9 219 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 CCDC71Q8IV32 467 aaPredicted RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 ENTHD1Q8IYW4 607 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 SLC22A15Q8IZD6 547 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 KRTCAP2Q8N6L1 136 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ZNF540Q8NDQ6 660 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 GPR26Q8NDV2 337 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 LKAAEAR1Q8TD35 194 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 APOBEC4Q8WW27 367 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 APH1BQ8WW43 257 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 ROBO4Q8WZ75 1007 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 PDXPQ96GD0 296 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 C10orf90Q96M02 699 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 FOPNLQ96NB1 174 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 TRNT1Q96Q11 434 aaKnown RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 COPS4Q9BT78 406 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 TAPBPLQ9BX59 468 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 DGCR6LQ9BY27 220 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 DCSTAMPQ9H295 470 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 DPEP2Q9H4A9 486 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 NT5DC2Q9H857 520 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 DYRK4Q9NR20 520 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 PDP1Q9P0J1 537 aaPredicted RBP4.09□□□□□ -1.75
SSR3-209ENST00000498205 RNF6Q9Y252 685 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 IFT52Q9Y366 437 aa4.09□□□□□ -1.75
SSR3-209ENST00000498205 LTBP2Q14767 1821 aa4.09□□□□□ -1.76
SSR3-209ENST00000498205 HELZP42694 1942 aaKnown RBP4.09□□□□□ -1.76
SSR3-209ENST00000498205 UTRNP46939 3433 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 HTR3EA5X5Y0 456 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 C15orf61A6NNL5 157 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 IQCF5A8MTL0 148 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 EFCAB9A8MZ26 197 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 GPR89AB7ZAQ6 455 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TRIM77I1YAP6 450 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 HAT1O14929 419 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 AIREO43918 545 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MT-ND2P03891 347 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 GPR89BP0CG08 455 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ERGP11308 486 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 EPCAMP16422 314 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 CD36P16671 472 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 LHCGRP22888 699 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MPZP25189 248 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TEAD1P28347 426 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 SOX6P35712 828 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TSFMP43897 325 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 YAP1P46937 504 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 TMED10P49755 219 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 RGS6P49758 472 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 SGSHP51688 502 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 CRYBA2P53672 197 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 IST1P53990 364 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 BPTFQ12830 3046 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 NCF4Q15080 339 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 INAQ16352 499 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 PRRC2BQ5JSZ5 2229 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 TCTE1Q5JU00 501 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 SPANXN2Q5MJ10 180 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 LRRC66Q68CR7 880 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 OR4F3Q6IEY1 312 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 FAM71E1Q6IPT2 247 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ZNF770Q6IQ21 691 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 SCIMPQ6UWF3 145 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 GET4Q7L5D6 327 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 ADCK1Q86TW2 530 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 LRRTM1Q86UE6 522 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 THOC6Q86W42 341 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 RNF130Q86XS8 419 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 SLC39A11Q8N1S5 342 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 METTL4Q8N3J2 472 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms