RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 CISD1Q9NZ45 108 aaKnown RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 NDUFAF4Q9P032 175 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 RIMS3Q9UJD0 308 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 POU2F3Q9UKI9 436 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 RCE1Q9Y256 329 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 ALPK2Q86TB3 2170 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 LYPD3O95274 346 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 WNT11O96014 354 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 MT-ND1P03886 318 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 RAP2AP10114 183 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 PAX1P15863 534 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 CD40P25942 277 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 ATP5J2P56134 94 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 TRAM2Q15035 370 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 HMBOX1Q6NT76 420 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 SLC22A25Q6T423 547 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 WDR88Q6ZMY6 472 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 ADGRG5Q8IZF4 528 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 SCAIQ8N9R8 606 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 ADPRHL1Q8NDY3 354 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 TMEM255BQ8WV15 326 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
NUP50-219ENST00000497960 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
NUP50-219ENST00000497960 C18orf12Q96KH6 178 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 Q96MF0 132 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 ALKBH3Q96Q83 286 aaPredicted RBP13.44□□□□□ -0.26
NUP50-219ENST00000497960 C1QTNF6Q9BXI9 259 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 LINC00470Q9BZP3 86 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 HEATR1Q9H583 2144 aaKnown RBP13.44□□□□□ -0.26
NUP50-219ENST00000497960 IL1RAPQ9NPH3 570 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 OBP2BQ9NPH6 170 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
NUP50-219ENST00000497960 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
NUP50-219ENST00000497960 LOC102725191A0A1B0GVB3 256 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 TCRBV3S1A0A5B6 114 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 FFAR1O14842 300 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 SLC43A1O75387 559 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 UPK3AO75631 287 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
NUP50-219ENST00000497960 SOD3P08294 240 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 DANCRP0C864 163 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 UMPSP11172 480 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 RBM34P42696 430 aaKnown RBP13.43□□□□□ -0.26
NUP50-219ENST00000497960 UGT2B15P54855 530 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 PMS2P3Q13401 168 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 NKAIN4Q8IVV8 208 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 UEVLDQ8IX04 471 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 CANT1Q8WVQ1 401 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 ZNF347Q96SE7 839 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 PRSS27Q9BQR3 290 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 BDH2Q9BUT1 245 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 B3GAT1Q9P2W7 334 aa13.43□□□□□ -0.26
NUP50-219ENST00000497960 PIP5K1CO60331 668 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 PRSS23O95084 383 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 GADD45GO95257 159 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 MT-ATP6P00846 226 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 BGLAPP02818 100 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 INHBBP09529 407 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 HOXB6P17509 224 aaKnown RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 PAX7P23759 505 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 RRM2P31350 389 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 MAGEA2P43356 314 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 SH3BGRP55822 239 aaPredicted RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 UBE2NP61088 152 aaKnown RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 ROR2Q01974 943 aaKnown RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 LTBQ06643 244 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 LGALS3BPQ08380 585 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 PGGHGQ32M88 737 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 TBRG1Q3YBR2 411 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 HIKESHIQ53FT3 197 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 TSEN54Q7Z6J9 526 aaKnown RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 BIVMQ86UB2 503 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 PIK3C3Q8NEB9 887 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 OR1K1Q8NGR3 316 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 HS6ST2Q96MM7 605 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 ANKRD19PQ9H560 264 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 YY1AP1Q9H869 796 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 FKRPQ9H9S5 495 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 MAN2C1Q9NTJ4 1040 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 MRPL39Q9NYK5 338 aaKnown RBP13.42□□□□□ -0.26
NUP50-219ENST00000497960 MED31Q9Y3C7 131 aa13.42□□□□□ -0.26
NUP50-219ENST00000497960 MS4A18H0YCH9 400 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 OVOL3O00110 214 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 ZNF432O94892 652 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 AHCYP23526 432 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 SMIM11AP58511 58 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 PUDPQ08623 228 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 CCNIQ14094 377 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 KPNB1Q14974 876 aaKnown RBP13.41□□□□□ -0.26
NUP50-219ENST00000497960 MS4A18Q3C1V0 323 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 AGAP6Q5VW22 663 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 ANKRD16Q6P6B7 361 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 LINC00114Q6XXX2 140 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 ZNF730Q6ZMV8 503 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 PIWIL3Q7Z3Z3 882 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms