RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SLC40A1Q9NP59 571 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 ZDHHC4Q9NPG8 344 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 UFSP2Q9NUQ7 469 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 SPATA7Q9P0W8 599 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 XCL2Q9UBD3 114 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 F11RQ9Y624 299 aaKnown RBP2.02□□□□□ -2.09
CD46-218ENST00000496723 DOCK9Q9BZ29 2069 aa2.02□□□□□ -2.09
CD46-218ENST00000496723 CABIN1Q9Y6J0 2220 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 IGSF9BQ9UPX0 1349 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 CCDC182A6NF36 153 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ARPC3O15145 178 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 IGLV3-19P01714 112 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 BGLAPP02818 100 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ZDHHC11BP0C7U3 371 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 TLX1NBP0CAT3 122 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 IGHV3-43DP0DP04 118 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 DBTP11182 482 aaKnown RBP2.01□□□□□ -2.09
CD46-218ENST00000496723 PGAM1P18669 254 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 GLRA2P23416 452 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 OMGP23515 440 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 CALRP27797 417 aaKnown RBP2.01□□□□□ -2.09
CD46-218ENST00000496723 SSR1P43307 286 aaKnown RBP2.01□□□□□ -2.09
CD46-218ENST00000496723 EXOC3L2Q2M3D2 409 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ZBED5Q49AG3 693 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 XKR4Q5GH76 650 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 SLC25A34Q6PIV7 304 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 PLA2G4DQ86XP0 818 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 PGAM4Q8N0Y7 254 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ZADH2Q8N4Q0 377 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 FAM133AQ8N9E0 248 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 STEAP2Q8NFT2 490 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 VN1R2Q8NFZ6 395 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 LRRC58Q96CX6 371 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 CXorf40BQ96DE9 158 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 LINC00477Q96M19 166 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 RBM14Q96PK6 669 aaKnown RBP2.01□□□□□ -2.09
CD46-218ENST00000496723 CCT7Q99832 543 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ZSCAN5AQ9BUG6 496 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 LY9Q9HBG7 655 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 NOX3Q9HBY0 568 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 BFARQ9NZS9 450 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 ZNF629Q9UEG4 869 aaPredicted RBP2.01□□□□□ -2.09
CD46-218ENST00000496723 ATP10AO60312 1499 aa2.01□□□□□ -2.09
CD46-218ENST00000496723 IGLV2-18A0A075B6J9 118 aa2□□□□□ -2.09
CD46-218ENST00000496723 A0A0U1RQS6 177 aa2□□□□□ -2.09
CD46-218ENST00000496723 COLCA2A8K830 154 aa2□□□□□ -2.09
CD46-218ENST00000496723 PRKAB2O43741 272 aa2□□□□□ -2.09
CD46-218ENST00000496723 RAMP3O60896 148 aa2□□□□□ -2.09
CD46-218ENST00000496723 MTX2O75431 263 aa2□□□□□ -2.09
CD46-218ENST00000496723 CISD3P0C7P0 127 aa2□□□□□ -2.09
CD46-218ENST00000496723 GRIA1P42261 906 aa2□□□□□ -2.09
CD46-218ENST00000496723 CRYBB1P53674 252 aaPredicted RBP2□□□□□ -2.09
CD46-218ENST00000496723 ERVK-25P63136 954 aa2□□□□□ -2.09
CD46-218ENST00000496723 FGL1Q08830 312 aa2□□□□□ -2.09
CD46-218ENST00000496723 PDK3Q15120 406 aa2□□□□□ -2.09
CD46-218ENST00000496723 STK11Q15831 433 aa2□□□□□ -2.09
CD46-218ENST00000496723 CNIH2Q6PI25 160 aa2□□□□□ -2.09
CD46-218ENST00000496723 H2AFVQ71UI9 128 aa2□□□□□ -2.09
CD46-218ENST00000496723 UTS2BQ765I0 119 aa2□□□□□ -2.09
CD46-218ENST00000496723 ECHDC2Q86YB7 292 aa2□□□□□ -2.09
CD46-218ENST00000496723 VSTM4Q8IW00 320 aa2□□□□□ -2.09
CD46-218ENST00000496723 SYNPRQ8TBG9 265 aa2□□□□□ -2.09
CD46-218ENST00000496723 RPRD1AQ96P16 312 aaPredicted RBP2□□□□□ -2.09
CD46-218ENST00000496723 SLC39A3Q9BRY0 314 aa2□□□□□ -2.09
CD46-218ENST00000496723 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
CD46-218ENST00000496723 GORASP2Q9H8Y8 452 aa2□□□□□ -2.09
CD46-218ENST00000496723 SIRT7Q9NRC8 400 aa2□□□□□ -2.09
CD46-218ENST00000496723 ZNF222Q9UK12 451 aa2□□□□□ -2.09
CD46-218ENST00000496723 PTBP2Q9UKA9 531 aaKnown RBP2□□□□□ -2.09
CD46-218ENST00000496723 TMCC3Q9ULS5 477 aa2□□□□□ -2.09
CD46-218ENST00000496723 KCNIP3Q9Y2W7 256 aa2□□□□□ -2.09
CD46-218ENST00000496723 ATAD2BQ9ULI0 1458 aa2□□□□□ -2.09
CD46-218ENST00000496723 MN1Q10571 1320 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 NUP214P35658 2090 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 TRAV26-1A0A087WT03 109 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 OR5B21A6NL26 309 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 INS-IGF2F8WCM5 200 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 TOM1O60784 492 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 SNNO75324 88 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 SPAG6O75602 509 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 RBBP9O75884 186 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 C6orf47O95873 294 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 MUC1P15941 1255 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 NPY1RP25929 384 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 CCR1P32246 355 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 CEBPDP49716 269 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 HNMTP50135 292 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 GBX2P52951 348 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 GPM6BQ13491 265 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 TTLL9Q3SXZ7 439 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 PMF1Q6P1K2 205 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 ZNF836Q6ZNA1 936 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 Q6ZPB1 254 aaPredicted RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 FAM92BQ6ZTR7 304 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 HMGN2P46Q86SG4 172 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 PIANPQ8IYJ0 282 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 OR52M1Q8NGK5 317 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 OR5W2Q8NH69 310 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 SMARCD2Q92925 531 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 ZNF641Q96N77 438 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms