RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GTF2A1LQ9UNN4 478 aa7.72□□□□□ -1.17
U2AF1-212ENST00000496462 MOKQ9UQ07 419 aa7.72□□□□□ -1.17
U2AF1-212ENST00000496462 MEMO1Q9Y316 297 aa7.72□□□□□ -1.17
U2AF1-212ENST00000496462 TRBV4-1A0A0J9YWV2 114 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 SLC22A23A1A5C7 686 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 SLC22A31A6NKX4 558 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 PPP1R3DO95685 299 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 FADS2O95864 444 aaKnown RBP7.71□□□□□ -1.17
U2AF1-212ENST00000496462 TACSTD2P09758 323 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 GSSP48637 474 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 GDI2P50395 445 aaKnown RBP7.71□□□□□ -1.17
U2AF1-212ENST00000496462 ZP4Q12836 540 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 STX19Q8N4C7 294 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 ARIH2OSQ8N7S6 290 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 OR52E2Q8NGJ4 325 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 TRUB1Q8WWH5 349 aaKnown RBP7.71□□□□□ -1.17
U2AF1-212ENST00000496462 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.17
U2AF1-212ENST00000496462 TTYH2Q9BSA4 534 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 PRR14Q9BWN1 585 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 TINAGQ9UJW2 476 aa7.71□□□□□ -1.17
U2AF1-212ENST00000496462 TRAV27A0A087WT01 109 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 TUBAL3A6NHL2 446 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF670-ZNF695F2Z2N8 137 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 F13BP05160 661 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 HSD11B1P28845 292 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 CLDN18P56856 261 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 RPL18Q07020 188 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 RIPK1Q13546 671 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 CCNIQ14094 377 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 ARMC4Q5T2S8 1044 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 AP1ARQ63HQ0 302 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 COMMD2Q86X83 199 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 PAPD5Q8NDF8 572 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 OR5L1Q8NGL2 311 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 OR8J1Q8NGP2 316 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 DUS3LQ96G46 650 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 COG8Q96MW5 612 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 TAS2R16Q9NYV7 291 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 FBXO9Q9UK97 447 aaPredicted RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 RPL36Q9Y3U8 105 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 IGHV3-15A0A0B4J1V0 119 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 PRSS44E7EML9 344 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 STSP08842 583 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 HTR2AP28223 471 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 GFRA1P56159 465 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 MALLQ13021 153 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 FBXW9Q5XUX1 488 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 DOLPP1Q86YN1 238 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 OR6X1Q8NH79 312 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 SNX33Q8WV41 574 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 SPTSSAQ969W0 71 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 ESRP2Q9H6T0 727 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 IKZF2Q9UKS7 526 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 NDRG4Q9ULP0 352 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 NTNG1Q9Y2I2 539 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 NOP16Q9Y3C1 178 aaKnown RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 LIPGQ9Y5X9 500 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 NUP214P35658 2090 aaPredicted RBP7.71□□□□□ -1.18
U2AF1-212ENST00000496462 ESPL1Q14674 2120 aa7.71□□□□□ -1.18
U2AF1-212ENST00000496462 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 K7EM74 188 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 DHHO43323 396 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 OR8G3PP0DMU2 310 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 AGAP20933 346 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 MPGP29372 298 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SDHAP31040 664 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CD79BP40259 229 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 MAGEA2P43356 314 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ACKR1Q16570 336 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 FXNQ16595 210 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 PGGHGQ32M88 737 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ZIK1Q3SY52 487 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SLC35F1Q5T1Q4 408 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 C1orf94Q6P1W5 598 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 TMPRSS11AQ6ZMR5 421 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ZER1Q7Z7L7 766 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 TUSC5Q8IXB3 177 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 OR4K13Q8NH42 304 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 PFN4Q8NHR9 129 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 MNTQ99583 582 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 FAIMQ9NVQ4 179 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CENPVL1A0A0U1RR11 272 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 PLPP3O14495 311 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 FAM20BO75063 409 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 UBL3O95164 117 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SOX14O95416 240 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CRYAAP02489 173 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ECH1Q13011 328 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 PGBD2Q6P3X8 592 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CXXC5Q7LFL8 322 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 BHLHA15Q7RTS1 189 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SYT14Q8NB59 555 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 HAVCR2Q8TDQ0 301 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 NSMAFQ92636 917 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 RNASE6Q93091 150 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 MYDGFQ969H8 173 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 C7orf34Q96L11 122 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CCDC90BQ9GZT6 254 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms