RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ST8SIA1Q92185 356 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 SH3YL1Q96HL8 342 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-212ENST00000496458 TSC22D3Q99576 134 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 CGREF1Q99674 301 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 OSBPL10Q9BXB5 764 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 ERVK-6Q9BXR3 956 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 FBXO44Q9H4M3 255 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 KAT8Q9H7Z6 458 aaKnown RBP3.78□□□□□ -1.8
SF3B1-212ENST00000496458 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 ANKRA2Q9H9E1 313 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 TREM1Q9NP99 234 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 RNF6Q9Y252 685 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 GSTK1Q9Y2Q3 226 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 NPTNQ9Y639 398 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 BZW2Q9Y6E2 419 aaKnown RBP3.78□□□□□ -1.8
SF3B1-212ENST00000496458 SBF2Q86WG5 1849 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 ABCC6O95255 1503 aa3.78□□□□□ -1.8
SF3B1-212ENST00000496458 PARP4Q9UKK3 1724 aaKnown RBP3.78□□□□□ -1.8
SF3B1-212ENST00000496458 WNK3Q9BYP7 1800 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 MEGF6O75095 1541 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 C12orf71A8MTZ7 269 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 HAS3O00219 553 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 SHOX2O60902 331 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 FTH1P02794 183 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 PRPS2P11908 318 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 CCNB1P14635 433 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 CYP11B1P15538 503 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 PSMB1P20618 241 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 RORAP35398 523 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 OR3A4PP47883 348 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 PLTPP55058 493 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 RIPPLY3P57055 190 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 YWHAEP62258 255 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 RAB11AP62491 216 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 PPIDQ08752 370 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 MESDQ14696 234 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 GANABQ14697 944 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 RAB11BQ15907 218 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 SNCBQ16143 134 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 CDKN3Q16667 212 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TEX44Q53QW1 395 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 MLIPQ5VWP3 458 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TMEM53Q6P2H8 277 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 IGFL2Q6UWQ7 119 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 NCCRP1Q6ZVX7 275 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 DPY19L4Q7Z388 723 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 SCD5Q86SK9 330 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 NKAIN4Q8IVV8 208 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 SLC7A5P1Q8MH63 180 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 CADM2Q8N3J6 435 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 MLKLQ8NB16 471 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TRPV1Q8NER1 839 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 NFAM1Q8NET5 270 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 PDCD6IPQ8WUM4 868 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 ASZ1Q8WWH4 475 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TOP1MTQ969P6 601 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TM4SF19Q96DZ7 209 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 DNAJA3Q96EY1 480 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 ZNF799Q96GE5 643 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 AKR1E2Q96JD6 320 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 IMMP1LQ96LU5 166 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 CENPKQ9BS16 269 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 TRIM62Q9BVG3 475 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 ADAM28Q9UKQ2 775 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 FAM208AQ9UK61 1670 aaKnown RBP3.77□□□□□ -1.81
SF3B1-212ENST00000496458 OVOS2A0A0G2JMS6 1433 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 DISP2A7MBM2 1401 aa3.77□□□□□ -1.81
SF3B1-212ENST00000496458 AK9Q5TCS8 1911 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 PPIAL4EA0A075B759 164 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 A0A1B0GVL5 298 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 A0A1W2PPV4 95 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 DUX1O43812 170 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 NIPSNAP2O75323 286 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CABYRO75952 493 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 STK17BO94768 372 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 NOL4O94818 638 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CST1P01037 141 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 IGFBP1P08833 259 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 H2AFZP0C0S5 128 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 PPIAL4FP0DN26 164 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TSPAN8P19075 237 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 ZP3P21754 424 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 S100A1P23297 94 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 ACVR1BP36896 505 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 BCAP31P51572 246 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TPMTP51580 245 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 DIO3P55073 304 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CDH6P55285 790 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 OTUD4Q01804 1114 aaKnown RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 BST2Q10589 180 aaKnown RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 SLAQ13239 276 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 EIF2B1Q14232 305 aaKnown RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TGFBIQ15582 683 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 ZNF829Q3KNS6 432 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CCDC153Q494R4 210 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 SMUG1Q53HV7 270 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 LGSNQ5TDP6 509 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 OR4F3Q6IEY1 312 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TMEM107Q6UX40 140 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms