RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 RPS13P62277 151 aaKnown RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 HSD11B2P80365 405 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SRSF5Q13243 272 aaKnown RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 CDK5R1Q15078 307 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 PPA1Q15181 289 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TAF13Q15543 124 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 RPE65Q16518 533 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TNFAIP8L2Q6P589 184 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 SERPINA13PQ6UXR4 307 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 NPSR1Q6W5P4 371 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TMEM184AQ6ZMB5 413 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 PNLDC1Q8NA58 520 aaKnown RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 DUSP19Q8WTR2 217 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 RHOVQ96L33 236 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 WFDC6Q9BQY6 131 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 LAT2Q9GZY6 243 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 V9GY05 133 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 NOTCH4Q99466 2003 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ELOA3CA0A087WX78 387 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 ANTXRLA6NF34 631 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 J3QLW9 94 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 PIP5K1CO60331 668 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ZNF821O75541 412 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 CH25HO95992 272 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 AK1P00568 194 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ITGA5P08648 1049 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ZNF19P17023 458 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 CRABP1P29762 137 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ACVR1BP36896 505 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SLC6A9P48067 706 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SLC26A5P58743 744 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TAS2R41P59536 307 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TAS2R50P59544 299 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ACTA2P62736 377 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ACTG2P63267 376 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 EFEMP1Q12805 493 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 CCINQ13939 588 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 GAS6Q14393 721 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 RHEBQ15382 184 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 MRM1Q6IN84 353 aaKnown RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 FAAP20Q6NZ36 180 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 RPL22L1Q6P5R6 122 aaKnown RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 NUDT13Q86X67 352 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 OR1J2Q8NGS2 313 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ZNF764Q96H86 408 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 NOL4LQ96MY1 436 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 SOX7Q9BT81 388 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SPON2Q9BUD6 331 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ATG10Q9H0Y0 220 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SYT4Q9H2B2 425 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 PISDQ9UG56 409 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 MOKQ9UQ07 419 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 ZNF337Q9Y3M9 751 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 PRKAB1Q9Y478 270 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 TTC28Q96AY4 2481 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TRBV6-7A0A0A0MS04 114 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 XRCC3O43542 346 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 HMGA1P17096 107 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 S1PR1P21453 382 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 CDK2P24941 298 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 PRKXP51817 358 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SLC7A9P82251 487 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 MC1RQ01726 317 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 RNASE10Q5GAN6 216 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 SLC35D3Q5M8T2 416 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 HIST2H3PS2Q5TEC6 136 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 COMMD1Q8N668 190 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 KISS1RQ969F8 398 aaPredicted RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 FBXO17Q96EF6 278 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 POTEKPQ9BYX7 375 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 LINC00597Q9H2U6 94 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 NCDNQ9UBB6 729 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 IL20RAQ9UHF4 553 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 IGLV3-16A0A075B6K0 115 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 DNAJB6O75190 326 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 CEBPBP17676 345 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 MAOAP21397 527 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 CD1CP29017 333 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 PYCR1P32322 319 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 RABIFP47224 123 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 UBE2MP61081 183 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 ZNF85Q03923 595 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TAF10Q12962 218 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SKP2Q13309 424 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TXNDC8Q6A555 127 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 PLBD1Q6P4A8 553 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 GALNT16Q8N428 558 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 OR5R1Q8NH85 324 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SUN3Q8TAQ9 357 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SNX33Q8WV41 574 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms